Theobroma cacao (cacao): 18592004
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Entry
18592004 CDS
T02994
Name
(RefSeq) transcription initiation factor TFIID subunit 4b
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
18592004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcc03021
]
18592004
03036 Chromosome and associated proteins [BR:
tcc03036
]
18592004
Transcription machinery [BR:
tcc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
18592004
Coactivators
SAGA/TFTC/STAGA complex
18592004
Chromosome and associated proteins [BR:
tcc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
18592004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
Motif
Other DBs
NCBI-GeneID:
18592004
NCBI-ProteinID:
XP_007018536
UniProt:
A0AB32UV58
LinkDB
All DBs
Position
8:4469451..4476049
Genome browser
AA seq
950 aa
AA seq
DB search
MDPSIVKLLEEDEDESMHSGADVEAFQAALNRDIEGDAATTSQTSGSNTAVLSQGSNPAS
CQSVAQWPSKGQDGNTNFQNQRALQSAQQQQQPSSEMEQKQQGAVVAGSQHHVRQPNDVP
QEINRLPQQQKQPQDDRQQGVAEQVSAQVPQSTGVQTTEKSPIPAREPERTNNQDSESQY
MKLQKMSNQQAGGTEQPNNPMNRGKQVPFAVLLPALLPQLDKDRAMQLHTLYGKLKKNEI
AKDGFVRHMRDIVGDQMLRLAVNKLQVQMSSNQFPLQSQAAARQNTPRMPSVSAGATQFA
GPHSLAQLQQKGPNSPATPSRAPSPAVPMQTNSSYSSTENKAPKSQEMDRQSDSRFGVLG
SQISSFSTTTVNQERDRSSIPVQGLNKQQQQHLNFPQTSFSMHGSSSYHPYSGPSVNASG
SSLKPQPHDSQMRQTALHQSMGSNPVGGPTQAMNVMSGPKFERQNSSNDPNRLQGGSLSH
FSNSSVPWQASSSKETNPGPLSSVTYVKQESVDQGAEHQHKPHLSASQGLPTALGEQGNA
VTTTPKDEPLEKQSSRIGFSTPNSMVPPNSVSPITTQVDSNVPLGSRNPSVPSLAGANSR
TPQKKPSVGQKKPLETLGSSPPPSSKKQKVSGAFLDQSIEQLNDVTAVSGVNLREEEEQL
FSGPKDDSRVSEASRRVVQEEEERLILQKTPLQKKLAEIMAKSGLKNISNDVERCVSLCV
EERMRGLICNLIRLSKQRVDDEKSRHRTLITSDVRQQIMMMNRNAREEWEKKQAEAEKLR
KLNEPEAETAVDGDKEKDDNRVKSVKANKEEDDKMRTTAANVAARAAVGGDDMLSKWQLM
AEQARQKREGGMDAASGSQAGKDVNCRPLSASVKNTKDNQESEKRGPLSPLASGASRKFG
RNQVITPQTRVARTISVKDVIAVLEREPQMSKSTLIYRLYEKIRSEAAAE
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggacccttccatagtaaaactccttgaagaagacgaggacgagtctatgcattctgga
gcagacgtggaggccttccaggctgccttgaatcgagatatcgaaggcgatgccgccact
acttctcagacgtctggttcaaataccgcagttttgtctcaaggaagcaatccagcttcc
tgtcagtcagttgcacaatggccgtccaaggggcaagatgggaacaccaactttcaaaat
caacgggcccttcaaagtgcacagcaacaacagcagccttcttctgaaatggagcaaaag
caacagggagctgttgttgctgggagtcagcatcacgtacgacagccaaatgatgttccc
caagagattaatcgtttaccacaacaacaaaaacaaccccaagatgatcgtcaacaagga
gtagctgaacaagtttctgcccaagttcctcaatcgactggggttcagactactgaaaaa
agtcctatcccagcacgtgaaccagagagaaccaataatcaagacagtgaatcacaatat
atgaaattacagaagatgagtaatcagcaggctggtgggacagagcagccaaataatcct
atgaatcgaggaaagcaagtaccgtttgctgttttgttgcctgccttactgccccaactt
gataaagacagagccatgcagcttcataccttgtatggtaaactaaagaaaaatgaaatt
gcaaaagatgggtttgtccgacacatgagagatattgtaggagaccagatgctgaggttg
gcagtaaacaagttacaagtgcagatgagttccaaccaattcccattacagtcccaggct
gcagcacggcagaatactccgaggatgccatctgttagtgctggtgccacacagttcgct
ggtccacattcattagctcagctgcagcaaaaaggccctaattctcctgccactccatct
cgtgctccctctccagcagtccccatgcagacaaattcaagttattcatccactgaaaac
aaggctccaaaatctcaagagatggaccgccaatcagattctcgctttggagtgctagga
agccaaatttcttcctttagtacaaccaccgtgaatcaagaaagagaccgctcttcaatc
ccagtacaaggacttaacaagcagcaacaacaacatttgaatttcccgcaaacttctttt
tccatgcatgggagcagtagttatcacccatactctgggccaagtgttaatgcttcagga
tcctctttaaagccgcaacctcatgattcacaaatgaggcaaactgcacttcatcaaagc
atgggatcaaatcctgtaggaggaccaacccaggccatgaacgtgatgagtggacctaag
tttgagaggcaaaactctagtaatgacccaaataggttgcagggtggttctctttctcac
ttttcaaatagttcagttccttggcaagcgtcatcaagtaaggagacaaatcctggccct
ttgtcatcagtgacatatgtgaaacaggaatctgttgatcaaggtgctgagcaccagcac
aaacctcatttgtctgcatcccagggattgcctactgcactaggtgaacagggaaatgca
gttacaactactccaaaggatgagcctttagagaagcagtcttctagaattggcttctca
acgcctaacagtatggtgcctcctaattcagtttctcccattactacacaagtggattct
aatgttccgttgggctctcggaatccctctgtgccctctttggctggggccaattcaaga
acacctcaaaaaaagccttctgttggccagaagaaaccacttgaaactcttggttcatca
ccaccaccatcaagtaagaagcaaaaagtatctggagcctttttggatcagagcattgaa
caactaaatgatgtcactgctgtcagtggagtcaatctcagggaagaggaggagcaacta
ttttctggccccaaagatgacagtcgagtttcagaagcatctagaagggttgtgcaagag
gaagaagaaagactgattttgcaaaaaactccgttgcagaagaaattggctgaaattatg
gccaaaagtggtttgaagaatataagcaatgatgttgagcgatgcgtgtccctgtgtgtg
gaggaaagaatgcgtggactcatatgcaatttaatcagactgtcgaaacagcgggttgat
gatgagaagtctaggcaccggacactcatcacctcagatgttcggcaacaaattatgatg
atgaatcggaacgctagggaagaatgggagaaaaagcaggctgaagcagagaagctcagg
aaacttaatgaacctgaggctgagactgctgttgatggtgacaaggagaaagatgacaat
agagtaaaatcagttaaggcgaacaaggaggaggatgacaagatgaggaccactgctgca
aatgttgctgcacgggctgctgttggaggggatgacatgctgtcaaaatggcaacttatg
gctgagcaagcccgccagaaacgtgaggggggaatggatgcagcatctggttctcaagca
ggtaaagatgtgaactgcaggcctctatctgcatctgtaaaaaatacaaaggacaatcaa
gaatcagaaaagaggggcccactcagtcctcttgcatctggggcaagtaggaaatttggc
aggaaccaagttatcacgccccaaactagagtggctcgtactatttctgttaaggatgtg
attgcagttctggaaagagagccccagatgtctaagtctacacttatttatcgcttgtat
gaaaaaatccgctccgaggctgcagctgagtga
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