Theobroma cacao (cacao): 18592085
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Entry
18592085 CDS
T02994
Name
(RefSeq) SWI/SNF complex subunit SWI3B
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
18592085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcc03021
]
18592085
03036 Chromosome and associated proteins [BR:
tcc03036
]
18592085
Transcription machinery [BR:
tcc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
18592085
Chromosome and associated proteins [BR:
tcc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
18592085
PBAF complex
18592085
GBAF(ncBAF) complex
18592085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
SWIRM-assoc_1
Myb_DNA-bind_6
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
18592085
NCBI-ProteinID:
XP_007018665
UniProt:
A0AB32UV09
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Position
8:4877221..4880576
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AA seq
483 aa
AA seq
DB search
MAGRSPVKEADSSDTIPTPAQSKPPQISAKSTTPAVKSEIPSTPTPCSRPPPSSSDADVI
HVPSYSRWFSREKIDACEVRFLPEFFDGRSPSKSPSVYMYYRNSIIKQFRENPSRKISYT
DARRALVGDVGSIRRVFDFLELWGLVNHSAASAPSKPAKDTANNNKSADAPSLEAPSSAA
PTSSSSKHSSAASRRFCGACKSLCTIACFVCDKYDSTLCARCYVRGNFRVGLSNADFRRV
EITDEPKADWSEKDTLLLLEAIMHYGDDWKKVAQHVGGRTDKDCVAHFVKLPFGEEFLGH
PSSDEAESGFETNKRMRLTPLADASNPIMAQAAFLSALAGVESAEAAARAAVTTLSEVDD
NTASKGRRGSFARNTRREADVSSNGDTNLNALERAYADVYALLEKEERDIERAITGITEV
QMKEIQDKILHFEELDLQMEKELAQLEGMKNLLFVDQLNLLFRRSYALKTEERAVENVKP
NVS
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaagatctccggttaaagaagcagactcctctgacaccatccccacccccgcc
caatcgaaacctccccaaatttccgccaaatccaccacccctgcggtcaagtctgaaatt
ccctccactcctactccctgtagccgtccaccgccatcctcctccgatgccgacgtcatt
cacgtccccagctactcccggtggttttcacgggagaagatagacgcgtgcgaggtccgt
ttccttccagagttcttcgatggtcgctcgccttccaaaagccctagtgtttacatgtat
tacaggaactccattataaagcaattcagggaaaatccttcccggaagattagctacact
gacgccaggagggctcttgtgggcgacgttggttccattcgaagggttttcgatttcctt
gagctgtggggtctcgtcaatcactccgccgcctccgctccctccaagcccgctaaagat
actgctaataataataagtccgcagacgccccttctcttgaagctccttcttctgctgcc
cccacctcctcctcctctaaacactcctccgctgcttctagacgattctgtggcgcttgc
aagtctctttgtaccattgcttgtttcgtttgcgacaagtatgactccactctttgtgca
aggtgctatgttcgaggcaactttagggttggtctcagcaatgctgatttcaggcgggta
gagatcactgatgaacctaaggcagattggtcggaaaaagataccttgctgcttctggaa
gccattatgcattatggtgatgactggaagaaggttgcacaacatgttggtggtagaact
gacaaggattgcgttgctcatttcgttaaacttccttttggggaggaatttcttggtcat
ccatcctctgacgaggctgaatctggatttgaaaccaataagaggatgcgcctcacacct
cttgctgatgctagcaacccaattatggctcaggctgcgtttctgtcagctttggctggt
gtggagagtgcagaagctgctgcccgagcagctgttaccactctatctgaggtggatgac
aacacagctagcaaagggcgtcgtggatcttttgcaagaaacacaagacgagaagcagac
gtttcatctaatggtgacaccaacctaaatgcattggaaagagcatatgcagatgtgtat
gcactgcttgagaaggaagaacgtgacattgaaagagctataactgggattacagaagtg
cagatgaaagagatccaagataagattcttcactttgaggagttggatttgcagatggag
aaagagttagcacaattggaggggatgaagaatctactttttgttgaccagctaaatctc
ttatttcgtagaagttatgcactgaaaactgaagaacgagcggtggagaatgtaaaacca
aatgtttcataa
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integrated database retrieval system