KEGG   Theobroma cacao (cacao): 18592152
Entry
18592152          CDS       T02994                                 
Name
(RefSeq) cryptochrome-1
  KO
K12118  cryptochrome 1
Organism
tcc  Theobroma cacao (cacao)
Pathway
tcc04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:tcc00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    18592152
SSDB
Motif
Pfam: FAD_binding_7 Cryptochrome_C DNA_photolyase
Other DBs
NCBI-GeneID: 18592152
NCBI-ProteinID: XP_007018772
UniProt: A0A061FGG0 A0AB32UV57
LinkDB
Position
8:complement(5240177..5244865)
AA seq 682 aa
MSGGACSIVWFRRDLRVEDNPALAAGVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL
AHLDSSLRSLGTCLISKRSTESVSSLLEVVKSTGATQLFFNHLYDPISLVRDHRAKEVLT
AHGVAVRSFNADLLYEPWDVNDAQGRPFTTFAAFWEKCLSMPYDPEAPLLPPKRIISGDV
SNCPSHPLAFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSATT
SFLSPHLHFGEVSVRKVFHLVRIKQVLWANEGNEAGEESVNLFIKSIGLREYSRYLSFNH
PYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS
FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQFEGYKFD
PHGEYVRRWLPELARLPTDWIHHPWNAPESVLQAAGIELGSNYPLPIVGIDAAKARLQEA
LSEMWQQEAASRAAIENGTEEGLGDSSESAPFAFPQDIQMEENLEPARNNAPATTRRYED
QMVPSMTSSLVRGEDEEPSLDLRTSAEESRAEVPRNLSMDQEPRRDILNQGVPQTVRNSN
TFLQFNIPTGVGNAEDSTAESSSSSGRRERDGGVVPVWSPPASSYSEQFIGDENGIGGSS
SYLQRHPRSHQIVNWRRLSQTG
NT seq 2049 nt   +upstreamnt  +downstreamnt
atgtcaggtggtgcttgtagcatagtttggttcaggagggatctcagagttgaagataat
ccggcacttgcagctggtgttagagcaggtgctgttgtggccgtttttatatgggcacct
gaagaagaaggccattattaccctgggagggtgtcaaggtggtggcttaagcagagtttg
gctcatcttgattcttctttgaggagtctcggtacttgtctcatctcaaagagatctact
gagagtgtgtcttctcttcttgaggttgttaaatctactggtgctactcagctcttcttc
aatcacttgtatgatcctatatcactggttagggatcatcgtgcaaaggaggtattaaca
gcccacggtgtagcagtgcgatctttcaatgcagatttactttatgaaccctgggatgta
aatgatgctcagggccgccctttcactacttttgctgctttctgggaaaaatgccttagc
atgccctatgaccctgaggctccgcttcttccacctaagagaataatctcaggtgatgtg
tcaaactgcccttcgcatccattggcgtttgaagatgaatcagagaagggaagcaatgca
cttctagctcgagcatggtcacctgggtggagcaatgctgataaggcattgaccacattc
attaatggacctctaattgagtactctaagaatagaagaaaggctgatagtgctacaacc
tcatttctctctccccacttgcattttggggaagtgagtgtgagaaaagtctttcatctt
gtccgcatcaagcaggttctatgggccaatgaagggaacgaggctggagaggagagtgtg
aacttgtttatcaagtcaattggactgagggaatattcaagatacttgagttttaaccat
ccttacagtcatgaaaggcctcttctcgggcatcttaagtttttcccttgggtagtggat
gagggctattttaaggcatggagacaaggtagaactggttatccactggtggatgctggc
atgagagagttgtgggccactggctggctacatgaccggataagagttgtagtttctagt
ttctttgtaaaggttctgcagcttccttggagatggggtatgaagtatttttgggatacc
ctcttggatgcagacttagaaagcgatgctcttggttggcagtatatatctggtactctt
ccagatggtcgtgagtttgaccgcatagataatccacagtttgagggttacaagtttgac
ccacatggagaatatgtccgacggtggcttcctgaactggcaagactgccaactgattgg
atacatcatccatggaatgctcctgaatctgtactccaagctgctggaattgagcttggg
tcaaattaccctctacctattgtaggaatagatgctgcaaaagccaggttgcaagaagca
ctttcagagatgtggcaacaagaagcagcatcaagggctgcaattgaaaatggaactgag
gagggccttggagactcttctgaatcagcgccatttgcctttcctcaagacatacaaatg
gaggaaaaccttgaaccagcaaggaacaatgctccagctacaacccggcgttatgaggat
cagatggttcctagcatgacttcttctttggtgagaggagaagatgaagaaccttctttg
gatcttagaacttcagcagaagagagcagagcagaagttccaagaaatttaagtatggat
caagaaccacgaagagacatattaaaccaaggagttccacaaacagttcgtaacagtaac
acttttctgcaatttaatatcccaacgggggtgggaaatgctgaggattccacagcagaa
tcttctagtagtagtggtaggagagagagggatggaggagttgttccagtttggtctcct
ccagcttctagttattcagagcagttcataggtgatgaaaacggtattggtgggagctca
tcttatttgcagaggcatccacggtcccaccaaatagttaactggaggcgtttatctcaa
actgggtga

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