Theobroma cacao (cacao): 18592152
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Entry
18592152 CDS
T02994
Name
(RefSeq) cryptochrome-1
KO
K12118
cryptochrome 1
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
18592152
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Motif
Pfam:
FAD_binding_7
Cryptochrome_C
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
18592152
NCBI-ProteinID:
XP_007018772
UniProt:
A0A061FGG0
A0AB32UV57
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Position
8:complement(5240177..5244865)
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AA seq
682 aa
AA seq
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MSGGACSIVWFRRDLRVEDNPALAAGVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL
AHLDSSLRSLGTCLISKRSTESVSSLLEVVKSTGATQLFFNHLYDPISLVRDHRAKEVLT
AHGVAVRSFNADLLYEPWDVNDAQGRPFTTFAAFWEKCLSMPYDPEAPLLPPKRIISGDV
SNCPSHPLAFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSATT
SFLSPHLHFGEVSVRKVFHLVRIKQVLWANEGNEAGEESVNLFIKSIGLREYSRYLSFNH
PYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS
FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQFEGYKFD
PHGEYVRRWLPELARLPTDWIHHPWNAPESVLQAAGIELGSNYPLPIVGIDAAKARLQEA
LSEMWQQEAASRAAIENGTEEGLGDSSESAPFAFPQDIQMEENLEPARNNAPATTRRYED
QMVPSMTSSLVRGEDEEPSLDLRTSAEESRAEVPRNLSMDQEPRRDILNQGVPQTVRNSN
TFLQFNIPTGVGNAEDSTAESSSSSGRRERDGGVVPVWSPPASSYSEQFIGDENGIGGSS
SYLQRHPRSHQIVNWRRLSQTG
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtggtgcttgtagcatagtttggttcaggagggatctcagagttgaagataat
ccggcacttgcagctggtgttagagcaggtgctgttgtggccgtttttatatgggcacct
gaagaagaaggccattattaccctgggagggtgtcaaggtggtggcttaagcagagtttg
gctcatcttgattcttctttgaggagtctcggtacttgtctcatctcaaagagatctact
gagagtgtgtcttctcttcttgaggttgttaaatctactggtgctactcagctcttcttc
aatcacttgtatgatcctatatcactggttagggatcatcgtgcaaaggaggtattaaca
gcccacggtgtagcagtgcgatctttcaatgcagatttactttatgaaccctgggatgta
aatgatgctcagggccgccctttcactacttttgctgctttctgggaaaaatgccttagc
atgccctatgaccctgaggctccgcttcttccacctaagagaataatctcaggtgatgtg
tcaaactgcccttcgcatccattggcgtttgaagatgaatcagagaagggaagcaatgca
cttctagctcgagcatggtcacctgggtggagcaatgctgataaggcattgaccacattc
attaatggacctctaattgagtactctaagaatagaagaaaggctgatagtgctacaacc
tcatttctctctccccacttgcattttggggaagtgagtgtgagaaaagtctttcatctt
gtccgcatcaagcaggttctatgggccaatgaagggaacgaggctggagaggagagtgtg
aacttgtttatcaagtcaattggactgagggaatattcaagatacttgagttttaaccat
ccttacagtcatgaaaggcctcttctcgggcatcttaagtttttcccttgggtagtggat
gagggctattttaaggcatggagacaaggtagaactggttatccactggtggatgctggc
atgagagagttgtgggccactggctggctacatgaccggataagagttgtagtttctagt
ttctttgtaaaggttctgcagcttccttggagatggggtatgaagtatttttgggatacc
ctcttggatgcagacttagaaagcgatgctcttggttggcagtatatatctggtactctt
ccagatggtcgtgagtttgaccgcatagataatccacagtttgagggttacaagtttgac
ccacatggagaatatgtccgacggtggcttcctgaactggcaagactgccaactgattgg
atacatcatccatggaatgctcctgaatctgtactccaagctgctggaattgagcttggg
tcaaattaccctctacctattgtaggaatagatgctgcaaaagccaggttgcaagaagca
ctttcagagatgtggcaacaagaagcagcatcaagggctgcaattgaaaatggaactgag
gagggccttggagactcttctgaatcagcgccatttgcctttcctcaagacatacaaatg
gaggaaaaccttgaaccagcaaggaacaatgctccagctacaacccggcgttatgaggat
cagatggttcctagcatgacttcttctttggtgagaggagaagatgaagaaccttctttg
gatcttagaacttcagcagaagagagcagagcagaagttccaagaaatttaagtatggat
caagaaccacgaagagacatattaaaccaaggagttccacaaacagttcgtaacagtaac
acttttctgcaatttaatatcccaacgggggtgggaaatgctgaggattccacagcagaa
tcttctagtagtagtggtaggagagagagggatggaggagttgttccagtttggtctcct
ccagcttctagttattcagagcagttcataggtgatgaaaacggtattggtgggagctca
tcttatttgcagaggcatccacggtcccaccaaatagttaactggaggcgtttatctcaa
actgggtga
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