Theobroma cacao (cacao): 18592246
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Entry
18592246 CDS
T02994
Name
(RefSeq) vacuolar protein sorting-associated protein 9A
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcc04131
]
18592246
Membrane trafficking [BR:
tcc04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
18592246
Protein recycling
Other Rab GTPase associated proteins
18592246
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
DUF4688
DUF6748
Motif
Other DBs
NCBI-GeneID:
18592246
NCBI-ProteinID:
XP_007018922
UniProt:
A0AB32UVX8
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All DBs
Position
8:5825034..5830425
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AA seq
466 aa
AA seq
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MENADVFLGLQDFLERMRQPSAADFVKSIKSFIVSFSNNAPDPERDSAAVQAFLANMEAD
FRAHPLWAGCSEEELDSAGEGLEKYVMTKLFTRVFASLPDDVKHDEQLSEKMALIQQFVR
PENLDIKPTFQNETSWLLAQKELQKINMYKAPRDKLVCILNCCKVINNLLLNASIASNEN
PPGADEFLPVLIYVTIKANPPQLHSNLLYIQRYRRQSRLVAEAAYFFTNMLSAESFISSI
DAKALSMEETEFEKNMEFARALLSGLSTDVDGLSSQIDQIAGHDPGESTESRHKTLMEDH
LVQPKSLETKPSNKEDQSSITKIPSISELENRGAAMLLKEDQTSKVFRDYPYLFAHAGDL
TISDVEDLLNNYKQLVFKYVSLLKGSGGGSATFPSSGSLAQANHHVETVKESAENRVLEQ
NIGLPKDTDTVDDGPNRVSNQENIESDFSKDEVVPPSKDNHDDTSE
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgccgatgttttcttaggattgcaggattttctagagcgcatgcgccagcct
tctgctgctgatttcgtcaaatccatcaaaagtttcatagtttcgttctcgaacaatgct
cctgatccggaaagggatagtgctgctgtacaggcgttccttgccaacatggaagctgat
tttcgagctcatccgctttgggctggatgctccgaggaggagctggacagtgctggtgaa
ggactggagaagtatgttatgacaaagttatttacccgtgtgtttgcttcacttccagat
gatgtaaaacatgatgagcaactttctgagaagatggctcttattcagcagtttgttcgg
cctgagaatttggatattaagccgacctttcagaatgagacatcttggctgcttgcacag
aaagagttacaaaaaatcaatatgtacaaggctccaagagacaagcttgtttgtatcctc
aattgttgcaaggttatcaataatttgttgcttaatgcttcaattgcttcaaacgagaat
cctcctggagcagatgaatttcttcctgtcttgatttatgttaccataaaggcaaatcct
ccacagctgcactcaaatttgttgtatatacaacgttatagacgtcaatctcgattagtt
gctgaagcagcctattttttcacaaacatgctctctgccgagtctttcatctcgagtatt
gatgcaaaagcactttcaatggaggaaactgagtttgagaagaacatggagtttgctcga
gctcttctgtctggcctttcaacagatgtggatggtctttccagtcaaattgaccaaatt
gctggacatgatcccggagaatctactgaatccagacataaaactcttatggaggaccac
ttagtacaacctaaatctttggaaacaaaaccttcaaataaggaagatcagtcatcaatc
actaaaattccatcaatctcagagttggagaatagaggggcagctatgcttttgaaggag
gatcagacgagcaaagtttttcgggattacccatacttgtttgctcatgcgggtgacttg
actatcagtgatgtggaagacctgctaaataactataagcaacttgtgttcaagtatgtt
agtcttttgaaaggatcgggtggtggttctgcaacttttccttcatccggatcactagct
caagccaatcaccatgttgaaacagtgaaggaatctgcagagaatagagtgttagaacag
aatattgggttgccaaaagatactgatacagtggatgatggtccaaatagagtttctaat
caagaaaatattgaatctgatttctcaaaggatgaggtagttccaccctcaaaggacaac
catgatgacacctctgaataa
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