Theobroma cacao (cacao): 18592412
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Entry
18592412 CDS
T02994
Name
(RefSeq) DNA topoisomerase 2-binding protein 1-A
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
18592412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tcc03032
]
18592412
03400 DNA repair and recombination proteins [BR:
tcc03400
]
18592412
DNA replication proteins [BR:
tcc03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
18592412
DNA repair and recombination proteins [BR:
tcc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
18592412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTCB-BRCT
BRCT
BRCT_2
LIG3_BRCT
TopBP1_BRCT0
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
18592412
NCBI-ProteinID:
XP_017981837
UniProt:
A0AB32WW79
LinkDB
All DBs
Position
8:complement(6990810..6998021)
Genome browser
AA seq
979 aa
AA seq
DB search
MMMLKTKAFKGSSVFMSRNLVPPEVFDKLHGVLKDSGAQVFLCCDPSRNGPDDFHVISSI
DHEKFEDLRAKGCNLLGPQCVLSCAKENRALPKQGFTCCLAMDGLKVLASGFDMDEKVKI
EKLVTAMGGVLHTKASLDVSFVVVKNVLAAKYKWALNVLKKPIVTLHWLYQCWGEHRVVP
QESYRVLPFSGLTICVTRIPADERKEIEKLIIQNGGKYSAELTKKCTHLICDAPEGDKYK
VARRWGHVHIVVRKWFDQSIARRACLNEESYPVQGGCSSSKKSVSGSLSTQHSQDKFRGS
SLSATSSMISEFNLSTVPPTGVGDPDLEATLSQNIPSMVSDAQVIVKEDGGEAPTLQPSN
ETKLDGCVANDSESEDNDLYLSDCRISLVGFEASEMRKLVMMVRRGGGSRYMSCNDKLTH
IVVGTPSEVEKKEVRSFAASGVMHVVKSNWLEDCDRQKKEIPVQQRHIAYDLLLPKDSVQ
SVKGAVIGMVSSNQSKSSVLANSGTGMSSFLGDNLDDKTKINRNGDKSLEATVRSSKQGV
PPTVNSTNNGWQKQHCGSIVLNLKNGMSSTVFKGKLFCFSNSFPEDRRAEIVEWVDQGGG
EVVDDHVKQSVNFIIECHGVISRSIIDSQITYVSTHWVRSCLEDGCLLDVGCHILYSPLP
CQIPFPGFKSFRFCVSQYEEKDRLLLRNLCFILGAKFVEKLTKKVTHLLCKFTSGPKYEA
ACKWGIYSVTAEWIYECVSQNKVVSLDPFFPKEVTAQDREAGLCTVSQFPTQAVQMMSVD
IPSQFMTQSQDLRTQTLGGKIESIIGGRDEAEQSNVHLKRARCMEEDDQNGLLASVVHLC
EPVLNENSTENNKSKIVGEAAQVLPDVAAAIEDLLEQTSKIHDQKSPERNGCDKSIFSSD
RTGLCQDHTDSHSVIGLSRHWLNRTVKKDETCSYSGDGNAGLYDGFSETQTESQVVGYEE
DLSGRQMLIDRVRTRSSMA
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgctgaagacaaaggcgttcaagggatcgagcgtgttcatgtcacgtaacctc
gttccccccgaagtattcgacaagcttcacggcgttctcaaggatagcggagcccaagtc
ttcctctgttgtgacccttctcgaaatggccccgatgacttccacgtcatctcttccatt
gatcacgagaaatttgaggatctcagagccaaaggctgtaatttgctaggtcctcaatgc
gtgctttcctgtgcaaaagaaaatagagctttacctaaacaaggatttacttgctgcctt
gcaatggacggcctcaaagtactagcatctggtttcgacatggatgaaaaggttaagatt
gaaaaattagtcacagccatggggggagtattgcacactaaagcatctttagatgttagc
ttcgtcgttgtaaagaatgttctagctgcaaagtataagtgggctttaaatgttttaaag
aaaccaattgttactcttcattggttatatcaatgctggggtgagcaccgtgttgttcct
caggagtcatacagggttcttcctttttctggattgactatctgtgttaccagaattcct
gcagatgagcgaaaggagattgaaaagcttatcatacaaaatggtggaaaatattcggct
gaactcaccaagaagtgcacacatttgatttgtgatgctcctgaaggtgacaagtataaa
gttgcccgaagatggggccacgttcatattgtagttcggaaatggtttgaccaatccatt
gctagacgagcatgtcttaatgaggagtcctatcctgtccagggtggctgttcatcttca
aagaaaagtgtgagtggttccttgtcaacacagcatagtcaagacaagtttagaggaagt
tctttgtctgcaacatcctcaatgattagtgaatttaatttgtccaccgtgcctcctact
ggagtgggagatccagatcttgaagctactctctcgcagaacatcccttctatggtatca
gatgctcaggtcattgttaaagaggatggtggtgaagcaccaactttgcagccctctaat
gaaacaaagcttgatggttgtgttgccaatgactctgaatcggaagacaatgatctatac
ttgtcagactgtagaatttcacttgttggctttgaagcttctgagatgcgtaagctggtt
atgatggtgcgtagaggtggtggatcccggtatatgtcatgcaatgataaattgacacat
atagttgtcgggactccatctgaagtggaaaagaaagaggtaagaagctttgcagcttca
ggtgtcatgcatgtggtaaaaagcaactggcttgaagactgtgatcgtcaaaagaaagaa
atccctgttcaacagaggcacattgcatatgacttactacttcctaaagattctgtacag
tctgtcaaaggagcggtgataggaatggtcagttctaatcaaagtaaatcctcggttctt
gcaaactctggaactggaatgtcatcatttttaggggacaatctagatgataagacgaaa
atcaacaggaatggtgacaagtctttggaagccactgtaagatcatccaagcaaggcgta
cctcctacagtaaatagtaccaataatggttggcagaagcagcattgcggctccatagtc
ctaaatcttaagaatgggatgtcatcaactgtatttaaggggaaattattttgcttttca
aattcatttcctgaagataggagagctgaaattgttgaatgggtggatcaaggtggagga
gaggttgttgatgatcatgttaaacagagtgtgaatttcattatcgagtgtcatggtgtg
atatccaggtctatcattgattcccaaattacttatgtttccactcattgggtccgatct
tgtttagaggatggatgcttgcttgatgttggttgtcacattctttattcaccacttccc
tgtcaaattccttttcctgggtttaaaagctttcggttttgtgtttcacaatatgaagag
aaggatagactgctgttaagaaatctgtgctttattcttggagccaagtttgtggaaaaa
cttacaaaaaaggtgacccatttattatgcaagttcactagtggaccaaaatatgaggct
gcatgtaaatggggaatatactcagttacagcagagtggatatatgaatgtgtgagtcag
aataaagttgtttctctggatccatttttcccaaaagaagttactgctcaagatcgagag
gcaggattatgcaccgtgagccaatttccaacacaagctgttcaaatgatgtctgtagac
attccgtctcagtttatgactcaatcacaggacctgagaacacaaactcttggtggtaaa
attgaaagtattattggtggtagagatgaggccgaacaatcaaatgttcatcttaaaaga
gcaaggtgcatggaagaagatgatcaaaatggtctgcttgcttctgtagtacatttatgc
gagcctgttttgaacgagaattctactgaaaacaacaaatcaaaaattgtgggggaagct
gctcaagttttgcctgatgtagcggctgctatagaagacttacttgagcaaactagtaag
attcatgatcagaagtcaccagagaggaatgggtgtgataaaagtatcttttcatctgat
cgtacgggcctttgtcaagaccatactgactctcattctgttattgggttatctagacat
tggttaaaccggactgtgaaaaaagatgaaacctgcagttattctggagatgggaatgcc
ggcctatatgatggtttcagtgaaacacaaactgagtctcaggttgtgggttatgaagaa
gatttgtcgggcaggcaaatgcttatagacagagttcgaacccggagtagcatggcctga
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