Theobroma cacao (cacao): 18592499
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Entry
18592499 CDS
T02994
Name
(RefSeq) ribosome maturation protein SBDS
KO
K14574
ribosome maturation protein SDO1
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
18592499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tcc03009
]
18592499
Ribosome biogenesis [BR:
tcc03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
18592499
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
18592499
NCBI-ProteinID:
XP_007019344
UniProt:
A0AB32UW30
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Position
8:8268874..8271782
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AA seq
395 aa
AA seq
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MRGRDGTRKRSGERKMSKTLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSRV
EKDLDEVLQSHTVYSNVSKGVLAKTKDLVAAFGTDDQTNICLEILEKGELQIAGKERESQ
FSSQFRDIATIVMQKTINPETQRPYTISMIERLMHEIHFAVDPHSSSKKQALEVIRELQK
NFPIKRSPMRLRITVPGQNLHSLSEKLNEWSATIVSKDESGSQLSIICEMEPGIFRECDA
LVRNSQGRLEILAVSVHAVGDTQVDLYDDEDIASHLPKESADSAPSNLPKESADSAPSNL
PQKSTDSVLQLSEKMQKQTISSGNENAEGEVKQQKCSTCKAFVGDSKQYRDHFKSEWHKH
NLKRKTRQLPPLTAEECLADMEMSDAKSDLQDYSF
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgggagggacggtacgagaaaaagaagcggcgagcgaaaaatgtcgaaaacgctg
gtgcagccgatagggcaaaagcggctgacgaacgtcgccgtcgtgcgtttgaagaaacac
ggcttgcgattcgagatcgcctgctacaaaaacaaagtcctctcctggcgttcccgcgta
gagaaggatttggacgaagtgttgcagtcccacacagtttactcaaacgtttcgaaagga
gtacttgctaagaccaaagatttggttgctgcttttgggactgatgatcagactaatatt
tgtttagagattttggagaaaggggagctacaaattgctgggaaggaaagggaatctcaa
ttttctagtcagtttcgggatatcgcaacgattgttatgcaaaagactatcaatcctgaa
actcaacgcccttatactattagtatgattgagaggctaatgcacgaaattcattttgct
gttgatccccatagtagctccaagaagcaggcactagaggttattcgtgagcttcagaag
aacttccctataaaacggtctccaatgagattacgaatcactgttcctggacaaaattta
cattctctgtctgagaagctcaatgaatggagtgccaccattgtttcaaaagatgaatct
ggaagtcagctatcaattatttgtgaaatggaaccaggaatttttcgagaatgtgatgca
cttgtgaggaattcacagggtagattggaaatacttgcagtgtccgtgcatgctgtgggg
gatacccaggtcgatctttatgatgatgaagatatagcgtcacatttacccaaggaatct
gctgattcagcgccatcaaatttacccaaggaatctgctgattcagcgccatcaaattta
ccccagaaatctactgattcggtgctccaactaagtgagaaaatgcaaaaacagaccatc
tcttcaggaaatgagaatgctgagggggaggtaaagcaacaaaagtgcagcacatgcaag
gcgtttgtgggggattccaaacaatacagggatcactttaagagtgagtggcacaagcat
aatttgaaacgcaaaaccaggcaacttcctcctcttactgcagaagagtgcttagctgat
atggaaatgagtgatgcaaagtccgatttgcaggattattcattttga
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