Theobroma cacao (cacao): 18592652
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Entry
18592652 CDS
T02994
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3
KO
K14948
polypyrimidine tract-binding protein 2
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tcc03041
]
18592652
Spliceosome [BR:
tcc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
18592652
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RL
TGF_beta
Motif
Other DBs
NCBI-GeneID:
18592652
NCBI-ProteinID:
XP_017981369
UniProt:
A0AB32WRS8
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All DBs
Position
8:15905884..15913613
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AA seq
450 aa
AA seq
DB search
MAEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDIPSAINALQF
YTNVQPTIRGRNVYVQFSSHQELTTMDQTAQGRGDEPNRILLVTIHHMLYPITVEVLHQV
FSPHGFVEKIVTFQKSAGFQALIQYQLRQSAVSARTSLQGRNIYDGCCQLDIQFSNLDEL
QVHYNNDRSRDFTNPNLPTEQKGRSSQPTGYGDVGGMYALEAHGARAVGFPQMANAAAIA
AAFGGGLPPGISGTNDRCTVLVSNLNPDRIDEDKLFNLFSLYGNIVRIKLLRNKPDHALV
QMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITQGADTHEYVNSNLNRFNRNAAKNY
RYCCSPTKMIHLSTLPQDVSEEEIVNHLAEHGTIVNTKLFEMNGKKQALVMFETEEQATE
ALVSKHASSLGGSIIRISFSQLQTIRENSQ
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaccttctaaagtcattcatgttcgcaatgtaggccatgaaatttctgaaaat
gatttgcttcagcttttccagccatttggagtgataacaaagcttgtaatgctccgcgca
aagaatcaggctcttcttcaaatgcaagatattccttcagccatcaatgcgttgcagttc
tacactaatgttcaaccaactattagagggaggaatgtctacgtccaattctcatctcat
caggaactaactacaatggatcagactgctcaaggacgaggtgacgagccgaatcgaatc
ctcctggttacaatccatcatatgctatatcctattaccgtggaagtgctacaccaggtt
ttctcacctcatggattcgtggagaagatcgtcacatttcagaagtcggctggttttcaa
gccctgatccagtatcaactgcgccaaagtgcagtctcagctagaacttcccttcagggc
cgtaatatttatgatggctgctgtcagctggatatacagttttcaaaccttgatgaatta
caagttcattacaataatgatcgatcaagggatttcacaaacccaaatcttccaacagaa
cagaagggcagatcctcacagcctactgggtatggtgatgtaggaggtatgtatgccctg
gaagctcatggagctagggcagttggatttccacagatggctaatgcagctgcaattgca
gctgctttcggaggaggtttgcctccaggaataagtgggacaaatgataggtgtacagtg
cttgtttccaatctaaatcctgatagaatagatgaggataagcttttcaacctgttctca
ctttatggaaacattgtgagaattaaacttctacgcaataaaccagatcatgctctagtt
cagatgggtgatggctttcaggctgaactggcagtacactttctcaagggggccatgcta
tttgggaagcgactggaggtcaacttttccaaacatcctaacataacacagggagctgac
acacatgaatatgtgaactcaaatctcaaccgctttaatcggaatgctgcaaagaactac
cgttactgctgttccccaacgaagatgattcatctttccactttacctcaggatgtatct
gaagaggaaattgtgaatcatttggcggaacatggcaccattgttaataccaagctcttt
gaaatgaatggaaagaagcaagcccttgttatgtttgaaactgaggagcaagccactgaa
gcccttgtctccaagcatgcaagctcgcttggtgggtcaataatccgaatttcattctct
cagttgcagacaataagagagaactcacagtaa
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