Theobroma cacao (cacao): 18592961
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Entry
18592961 CDS
T02994
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 2
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tcc04121
]
18592961
Enzymes [BR:
tcc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
18592961
Ubiquitin system [BR:
tcc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
18592961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-ANAPC11
AF_0924
zf-RING_4
zf-C3H2C3
Prok-RING_4
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
18592961
NCBI-ProteinID:
XP_007020001
UniProt:
A0AB32UVZ1
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All DBs
Position
8:16760149..16764713
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AA seq
448 aa
AA seq
DB search
MKMNRVVVLLVLWFLCLLSASWMTSASVVLIGKNVTLSFDDIEANFAPAIEGSGECGVLY
LAEPLDACSDLSNKVEEVSNVTSPFALVIRGRCSFDEKVRRVQKAGFKAAIVYDNDDDGI
LVAMAGTAAGIKINAVFVSKASGEILKKYAGCTDTELWLIPSFENSAWSIMAISFISLLA
MSAVLATCFFVRRHRIRRERPQSSRVREFHGMSRRLVKAMPSLVFTAVLEDNCTSRTCAI
CLEDYTVGEKLRILPCRHKFHAFCVDSWLTTWRTFCPVCKRDARTSTGDPPASESTPLLS
SIPSSVSSSVLSSARSSLASSSAIQIAPASSRCPSVSHIHPLASTPYVQQSLRSCHQSPS
ISLSRSSVDLRNTSSQRSHASHLVSPASLNYPSISPLNARYMSPYFPSPSNASPSLVSSS
GHQLHPLRCSESAASFSPFASAQSLPEC
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgaatcgtgttgtggtattattggtattatggtttctctgtttattgagtgct
tcttggatgacgtcagccagtgtggtgttgattgggaaaaacgttactctctctttcgat
gatattgaagctaatttcgctccggcgattgaagggtctggggaatgtggggtattatac
ttggcagagcctcttgacgcgtgttcggatttaagtaataaagttgaagaggtttcgaat
gttacttccccttttgcgctggttattagaggaaggtgcagtttcgatgagaaagtacga
agagtgcaaaaggcggggttcaaagctgctattgtctatgacaatgatgatgatggtatc
ctggttgcaatggcagggactgcagctggcataaagataaatgctgtctttgtctccaaa
gcttctggtgaaatactcaaaaagtatgctggatgtactgatacggagctgtggcttatc
cctagttttgaaaactcagcttggtcgatcatggcgatctcctttatttctctacttgcc
atgtcagcagtgctggcaacttgtttctttgtacgcagacatcgcatcagacgagaacgc
cctcaatcttctcgagttcgtgaattccatggaatgagcaggcgtttagtaaaagcaatg
cccagcttggtattcactgctgtcttagaggataattgtacttcaagaacgtgtgcaata
tgccttgaagactataccgtgggagagaagctcaggattcttccatgtcgtcataaattt
catgctttctgtgttgattcttggcttacgacatggagaactttttgccctgtttgcaag
cgtgatgcaagaaccagcacaggtgatccaccagcatcagagagtacaccattgctttca
tccatcccaagctctgtgtcctcctctgtgttgtcatctgctagatcttcattagcatca
tcatcagccatacaaattgccccagcatcgtcacggtgtccatcagtttctcatattcat
cctcttgccagcactccatacgtccagcaatcacttaggtcctgccatcaatccccttcc
atcagcttaagccgaagctcagtagatcttaggaacacatcttctcagagatcccatgct
tctcatttggtttcaccagcctcattgaattacccatctatatcacctcttaatgcaaga
tacatgtccccgtattttccaagcccaagcaatgcctcaccaagtttagtcagctcttct
ggtcaccagctgcatccactgcgttgcagtgagtcagcagctagtttttctcctttcgca
tctgctcaatctcttccagaatgttaa
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