Theobroma cacao (cacao): 18593017
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Entry
18593017 CDS
T02994
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tcc03016
]
18593017
Enzymes [BR:
tcc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
18593017
Transfer RNA biogenesis [BR:
tcc03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
18593017
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
18593017
NCBI-ProteinID:
XP_007020083
UniProt:
A0AB32UW24
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Position
8:17361930..17376660
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AA seq
623 aa
AA seq
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MEDIEDLLVGSGGAPPGFRLPLNAVGVNPRKKHRNKPNKISQTNDPLTPLLPPKIPGTQT
IYIKTFGCSHNQSDSEYMAGQLSAFGYAISDNPEEGDLWLINTCTVKSPSQSAMNTLITK
CKSAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLMNRKTLP
ALDLPKVRKNKFVEILPINVGCLGACTYCKTKHARGHLGSYTIDSLVERVKTVIADGVKE
IWLSSEDTGAYGRDIGVNLPILLNALVAELPPDGNTMLRIGMTNPPFILEHLKEIADVLR
HPCVYSFLHVPVQSGSDAILTAMNREYTVSEFRTVVDTLTELVPGMQIATDIICGFPGET
DEDFAQTVNLIKEYKFPQVHISQFYPRPGTPAARMKKVPSTIVKNRSRELTSVFEAFTPY
IGMEGRVERIWITEVAADGIHLVGHTKGYVQVLVIGPESMLGTSAIVKITSVGRWSVFGE
VIETLTQVNLKMAPEKVCNQEKCSTRFNQFDSGACSKEPEPCSCGPNCCGGQTILEECTV
SSNDSWMEDRSSKNLIGWLLRKRRNHVHKKVENGLALGLRKKQDWALGGWGIVDRALLVG
ILVSFFIIVAVIIHLEFRTILSK
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggaagacatagaagatttgttggttggcagtggcggagctcctcctgggttcaggtta
cctttgaatgcggttggagttaatcccaggaagaagcatagaaacaaacccaacaagatt
tctcaaacaaatgaccctctcactcctttactccctcccaaaatccctggcactcagact
atttatatcaagacttttgggtgctcacataaccagagtgacagcgaatatatggcaggt
cagctttcagcatttggctatgcaatatctgacaatcctgaggagggagacctttggctt
ataaatacatgcacagtgaaatctccaagtcagtcagctatgaacactctaataacaaaa
tgtaagagtgcaaaaaagccactggtggttgctgggtgtgttcctcaaggaagtcgagat
ctgaaagagctagagggggtcagcatagttggagttcagcaaattgaccgcgtggttgaa
gttgtagaagagaccctgaaaggtcatgaggtgcggcttatgaaccgcaagaccttgcca
gccctggaccttcctaaggtcagaaagaacaagtttgtcgagattcttccgattaatgtt
ggttgtttaggtgcttgcacttattgcaagacaaagcatgctcgtggtcatttagggagc
tacactattgacagtcttgttgagcgtgtgaaaactgttatagctgatggggtcaaagag
atatggttgagcagtgaagatactggagcttatggtcgtgacattggggttaacctacca
attttgttgaatgcccttgttgcggaacttcctcctgatgggaacacaatgctacgaatt
gggatgaccaatcctccttttatcttggagcacctgaaagagatagcagatgttttacgt
cacccgtgtgtatattcctttcttcatgtgccagttcaatctgggagtgatgccatcttg
accgcaatgaatcgggaatatactgtgagcgagtttaggactgtggtagataccttgact
gaacttgtgccaggaatgcagatcgcaactgatataatatgtggatttcctggtgaaact
gatgaagattttgctcaaacagtcaaccttattaaggaatacaagttcccacaagttcat
atatctcagttctatcctagaccagggacacctgctgcaaggatgaaaaaggtcccaagt
actattgtgaagaatcggagccgtgaattaacttctgtttttgaagcttttacaccatat
atcggtatggaaggcagagttgaaagaatatggattactgaagttgcagctgatggaatt
cacttggttggtcataccaagggatatgttcaggttcttgtaattggtccagaaagtatg
ttgggtacttcagctattgtgaaaataacatccgtgggaagatggtcggtgtttggtgaa
gtgattgagactctcacccaagtaaatttgaaaatggctcctgagaaggtgtgtaatcag
gagaaatgttctacccgcttcaatcagtttgacagtggtgcatgttcaaaagagccagaa
ccttgctcttgtggaccaaactgctgcggaggacagactatattggaagaatgcaccgtt
tccagcaatgatagttggatggaggatcgaagcagcaaaaatctgattggctggttactg
aggaagcggaggaaccatgtgcacaaaaaggtggagaatggccttgccctggggctaaga
aaaaagcaggactgggccctgggcggctggggtattgttgatagggctcttcttgttgga
atccttgtcagcttttttattattgttgcagtaataatacatctagaatttaggactatt
ttgtccaaatga
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