Theobroma cacao (cacao): 18593376
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Entry
18593376 CDS
T02994
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
18593376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcc03019
]
18593376
Messenger RNA biogenesis [BR:
tcc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
18593376
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_11
Motif
Other DBs
NCBI-GeneID:
18593376
NCBI-ProteinID:
XP_017980060
UniProt:
A0AB32WLZ4
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All DBs
Position
7:1274474..1278373
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AA seq
481 aa
AA seq
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MMVIADKMESDLGKLFIGGISWDTDEERLKEYFRKYGEVVEAMIMRDRVTGRARGFGFVV
FADPAVAERVIMDKHMIDGRTVEAKKAVPRDDQHILNRNVSSITGSPGPGRTKKIFVGGL
ASTVTEGDFKKYFDQFGSITDVVVMYDHNTQRPRGFGFITYDSEDAVDRVLHKTFHELNG
KLVEVKRAVPKELSPGPSRSPMIGYNYGLSRAANFLNSYAQGYNLSPLGGFGVRMDGRFN
PLASGRTGFPPFSTTGYGIGMNMEPGMSPSYGGSSNFGNGLGYGRIISPYYSGNSNRYNT
PIGYGVGSGRNDSVLSSATRNVWGNGGLSNATNASSPGGYLGSGSGSFGSLGNSGVNWSP
SPAQSGGNASGYTGSAGYGNADDNYGLGGVGYGRNGATVAAPTSSFAGSTGSFEGSYGDI
YRSGSVYGDSTWRSATPDLDGSSSFSYGLGNISSDVAVRTSEDYVGSYSVASRQSNRGIA
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgattgcagataagatggaatcagatcttggtaaactcttcattggtgggata
tcttgggacaccgatgaggaacgtctcaaggagtatttcaggaagtatggggaagtggtg
gaagcaatgatcatgagagatcgtgtcacaggtcgtgcccgtggcttcggtttcgttgtc
tttgctgatcctgctgttgctgagagggtaattatggataagcatatgattgatggtcgc
acggttgaggcaaagaaggctgttcctagggatgatcaacacattctaaacaggaacgtg
agtagcattactggatctcctggtcctggacgcacaaaaaagatttttgttggaggttta
gcatctacagtcaccgagggtgactttaagaagtactttgatcagtttggttcaattact
gatgttgtggtgatgtatgatcataacacgcagaggccgagagggttcggcttcattact
tatgattcagaggacgcggtagacagagtcctgcataaaacattccatgaactcaacggg
aaattggttgaggtcaagagggcagttcctaaagaactatctccaggccccagccgcagc
cctatgattggatataattatggcttgagtagggctgccaacttcctcaatagttacgct
cagggatataatcttagcccacttggaggatttggagtcaggatggatggtaggtttaat
cctcttgctagtggtcgaactgggtttcctccatttagtaccactggatatggaataggt
atgaatatggaaccaggaatgagtccaagctatggtgggagttccaactttggcaacggt
cttggatatgggagaataattagtccctattacagtgggaattcaaacaggtataacaca
cctattggctatggtgtaggaagtggaagaaatgattctgttttgagctctgctactagg
aatgtctggggaaatggaggcctaagcaatgccacaaatgcttccagccctggtggttac
ttggggtctggaagtgggagttttggttctttaggaaatagtggagtaaattggagccct
tctcctgcacaaagtggagggaatgcttctggctatactgggagtgctggttatgggaat
gctgatgataactatggtttgggaggggtaggatatggaagaaacggtgcaactgttgca
gctccaacatcatcatttgctgggtcaactggtagttttgaggggtcctatggggatatc
taccgcagtggttcagtttatggtgactcaacttggcggtctgcaactcctgacttagat
ggctctagctcattcagttatgggcttggcaatatatcttcagatgttgctgtgcgaact
tctgaggattatgttggaagttacagtgttgcaagtagacagtctaatagaggaattgct
gcctag
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integrated database retrieval system
