Theobroma cacao (cacao): 18593403
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Entry
18593403 CDS
T02994
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
18593403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcc03021
]
18593403
03036 Chromosome and associated proteins [BR:
tcc03036
]
18593403
Transcription machinery [BR:
tcc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
18593403
Coactivators
SAGA/TFTC/STAGA complex
18593403
Chromosome and associated proteins [BR:
tcc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
18593403
STAGA complex
18593403
TFTC complex
18593403
SAGA complex
18593403
SLIK complex
18593403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
TFIID-31kDa
Histone
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
18593403
NCBI-ProteinID:
XP_007020675
UniProt:
A0AB32UWM1
LinkDB
All DBs
Position
7:1395542..1399202
Genome browser
AA seq
535 aa
AA seq
DB search
MSNVPKEAIEVVAQSIGITNLSPDVALALAPDVEYRVREIMQEAIKCMRHSRRTVLTADD
VDNALNLRNVEPIYGFASRDPLRFKRAAGHKDLFYIDDKDVEFKEVIEAPLSKAPLETSV
TSHWLAIEGVQPAIPENASVEAPSDGKRAEHKEDGLSVDVKLPVKHVLSRDLQLYFEKIV
ELTLNRSVSVVFNRALLSLATDPGVHPLTPYFTYFITDEVARNLNNFRLLFALMRVAWSL
VQNENIHIEPYLHQLMPSVITCLVAKRLGNKFTDNHWELRNFAAKLVASICKRFGHVYHN
LQPRVTRTLLHAFLDPTKTLPQHYGALRGLAALGPSVVRLLILPNLEAYLQLLEPEMQPE
KQKNEIKRHEAWCVYGALLRAAGLCMYDRLKMFPGLLAPPNRPVWKSSGKVVTRNKRKAS
TDNLMQQPPLKKMATDSASGMMPINSMQVDMQGAVGGFSATMGGSNIGVSSISRQLSNDN
ISGREASGRVLKTSTVLAQAWKEDTHAGNLLASLFELFGESMLSFTPKPELSIFL
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgttccaaaagaagccattgaagtggtagcacagagcattggaattaccaat
ttgtccccagatgttgcccttgccctcgctcctgatgtcgaatatcgcgttcgcgagatc
atgcaggaggcgattaaatgcatgcgccattcgcggcggacggttctgacagctgatgac
gtggacaatgctcttaatcttagaaatgtggagccgatatatggctttgcctctcgtgat
ccactacggttcaaaagagctgctgggcataaggatttgttctacattgatgacaaggat
gtggagtttaaagaagtgattgaagcacctttatcgaaagcgccacttgagacatctgtt
acttctcactggctagcgatcgaaggcgttcaacctgcaattccagaaaatgcttcggtt
gaagcaccttctgatggcaaaagggctgaacacaaggaagatggactttctgttgatgtt
aaattacctgttaagcacgtattatctagagaccttcaactttactttgagaaaattgtg
gagcttactttgaatagatctgtctctgtcgtctttaatcgagcattactgagcttggca
acagacccaggagtccatcctttaactccttatttcacgtatttcattactgatgaggtt
gcacgtaatttaaataatttccgtctcttatttgcattgatgcgtgttgcctggagcctt
gttcagaatgaaaatatacacattgaaccttatttacaccaattgatgccatctgttatt
acctgccttgttgcaaaaagattagggaataaattcactgacaatcactgggaacttaga
aacttcgcagcaaagctagtggcatcaatatgcaaaagatttgggcatgtttatcacaat
cttcagccacgtgtgacaaggactctgctccatgcttttttggacccaacaaaaacattg
cctcagcattatggtgcacttcgaggtttagcagcccttggacccagcgtggttcgtcta
cttatactaccaaatcttgaggcatatttgcaactccttgaaccagaaatgcagcctgag
aagcagaagaatgaaataaaaaggcatgaagcttggtgtgtttatggtgccttgctgcgt
gcagctgggctgtgcatgtatgataggcttaaaatgttccctggtctgctagcccctcca
aatcgtcctgtctggaaaagcagtggaaaagttgtgacaagaaataaacgcaaagcaagc
acagacaacttgatgcagcaaccaccgctcaagaaaatggctaccgacagtgcaagtggt
atgatgccgataaattccatgcaagttgacatgcaaggggcagttggtggcttttccgcc
acaatgggaggttccaacattggtgtatcatcaatatcacggcagttatcaaatgataac
atatcgggaagggaggccagtggtcgagttttaaagacttcaacagttttagctcaggct
tggaaggaggacacacatgctgggaacttgctagcatcactatttgaactttttggtgaa
agcatgttgtcctttacccccaaacccgagctttccatcttcctttga
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