Theobroma cacao (cacao): 18593583
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Entry
18593583 CDS
T02994
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03030
DNA replication
tcc03410
Base excision repair
tcc03420
Nucleotide excision repair
tcc03430
Mismatch repair
tcc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
18593583
03410 Base excision repair
18593583
03420 Nucleotide excision repair
18593583
03430 Mismatch repair
18593583
03440 Homologous recombination
18593583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tcc03032
]
18593583
03400 DNA repair and recombination proteins [BR:
tcc03400
]
18593583
Enzymes [BR:
tcc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
18593583
DNA replication proteins [BR:
tcc03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
18593583
DNA repair and recombination proteins [BR:
tcc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
18593583
MMR (mismatch excision repair)
DNA polymerase delta complex
18593583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
DNA_pol_B_2
REV3_N
Zn_ribbon_NOB1
Motif
Other DBs
NCBI-GeneID:
18593583
NCBI-ProteinID:
XP_007020934
UniProt:
A0AB32UWZ8
LinkDB
All DBs
Position
7:complement(2480386..2490731)
Genome browser
AA seq
1097 aa
AA seq
DB search
MNNGGNSRKRPPPPSQHQPFPATKHQVTSPAPPPLPTEEDFVDEDVFLEETLMGEEDVES
LILRDVEERQALASRLSKWARPPLSGAYTSQSCSIVFQQLEIDYVIGESNKDLLPDSSGP
AAIIRIFGVTREGHSVCCLVHGFEPYFYISCPPGMGPDDISRFQQTLEGRMKELNRNSKV
PKFVRRVELVQKRSIMYYQRQKSQPFLKIVVALPTMVTSCRGILDRGIQIDGLGMKSFMT
YESNVLFALRFMIDCNIVGGNWIEIPAGKYKKTAKNLTYCQLEFDCLYSELISHAPEGDF
SKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGKDQPFIRNVMTLKSCSPIV
GVDVMSFDTEKEVLLAWREFIREVDPDIIIGYNICKFDLPYLIERAQTLGIAEFPILGRI
RNSRVRVKDTTFSSRQYGTRESKEVTVEGRVQFDLLQVMQRDYKLSSYSLNSVSAHFLSE
QKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIYNYVEMARVTGVPLS
FLLSRGQSIKVLSQLLRKSKQKNLVIPNVKQAGSEQGTYEGATVLEAKAGFYEKPIATLD
FASLYPSIMMAYNLCYCTLVTPEDVRKFNLPPECVNKTPSGETFVKPNLQKGILPEILEE
LLGARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCLEISSSVTS
YGRQMIEHTKKLVEDKFTVLGGYEHNAEVIYGDTDSVMVQFGVPDVEAAMNLGREAAEYI
SGTFTKPIKLEFEKVYYPYLLISKKRYAGLFWTNPQKFDKMDTKGIETVRRDNCLLVKNL
VNECLHKLLIDRDIPGAVQYVKNTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVEL
AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDPQYYLENQIS
KPLLRIFEPILKNASKELLHGSHTRSISISTPSNSGIMRFAKKQLSCIGCKALISNTDRT
LCSHCKGREAELYYKTVSQVSELEELFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKK
AQKDMVEAKRQLDRWNF
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacggcggcaactcaaggaagcgaccaccgccgccgtcgcaacaccaaccattt
ccggcaacgaagcaccaagtgacatcgccagcgcctcccccactgccgacggaagaagat
ttcgtcgatgaagatgtcttccttgaggaaaccctcatgggggaagaagacgttgaatcc
ttaatcctccgggacgttgaggaacgtcaagctctcgcttctcgtctttccaagtgggcc
cgccctcctctctctggtgcctacacttcccagtcttgtagcatcgttttccagcaattg
gagattgattatgtgattggagagagtaacaaagatttgctgcctgattcttctggtccc
gctgccattatccgaatttttggggttacaagagaaggacacagtgtttgttgtcttgtt
catggatttgagccttatttctacattagctgccctccaggaatgggccctgatgatata
tctcgttttcaacaaacccttgaggggaggatgaaggagttgaacagaaatagtaaggta
ccaaagtttgttcgacgagttgaattggttcagaaaaggagcattatgtattaccagcga
caaaagtctcaaccttttctcaagattgttgtggcattgccaacgatggttactagttgt
cgcggcattcttgatagaggtatacaaattgatggccttggtatgaagagcttcatgaca
tatgagagcaatgttctttttgcacttcgtttcatgattgattgcaacatcgttggtggt
aattggattgaaataccggctggcaaatataagaagaccgcaaagaacttgacctactgc
cagttggagtttgattgcttgtattcggagttgattagtcatgccccagagggggatttc
tcaaagatggctccatttcgcatattgagttttgacattgagtgtgctggtcgcaaaggt
cattttcccgagcctactcatgatcctgttatccaggtggcaaatctagttactttgcaa
ggaaaagatcaaccattcatccgaaatgtcatgacccttaagtcatgctctccaatagtt
ggtgttgatgtcatgtcttttgatacagaaaaagaagtcttgcttgcttggagggaattt
attcgtgaagtagaccctgatattataattggatacaacatttgcaagtttgatttacca
tatcttattgagagagcacagacattgggaatagcagaatttcctatacttggccgcatc
aggaatagtagggttcgtgtaaaagatacaacgttttcttcaagacagtatggaactagg
gagagcaaagaagttaccgtggaagggagagttcagtttgatttgcttcaggttatgcag
cgtgactacaaactaagttcttattcactgaattcagtttcagcacactttctttctgaa
cagaaggaggatgtccaccattcaataatatcagatcttcagaatgggaatgctgagact
agaaggcgtcttgctgtgtattgtttgaaggatgcttaccttccccagaggctcttggat
aaactcatgtttatttacaattatgtggagatggctcgtgtcacaggtgtccctctctct
tttcttctttctagagggcaaagcatcaaggtactttctcaacttcttaggaagtctaag
cagaaaaaccttgttattccaaatgtcaaacaggcaggatctgaacagggaacatatgaa
ggtgcaactgtgttggaagcaaaggcagggttctatgaaaagccaattgcaacactggat
ttcgcatctttgtatccatcaattatgatggcatataatttatgttattgcacactggta
acacctgaagatgttcgcaaattcaacctcccaccagaatgtgttaacaaaactccatct
ggtgaaacatttgttaaaccaaatctgcagaaggggatacttccagaaatcttggaagag
ctattaggtgctcgtaaacgagcaaaagcagatttaaaggaagcaaaggatccactagag
aaagctgttttagatggtcgacagctggccttgaagataagtgcaaattctgtatatgga
tttacaggagctactgtcggtcagttaccatgtttagagatttcttcaagtgttacaagc
tatggtcgacaaatgattgagcacaccaaaaaacttgttgaagataaattcacagtgcta
ggaggctatgaacacaatgctgaagttatatatggggacacagattcagtgatggtacaa
tttggtgtgcctgatgtagaagcagcaatgaacttggggagagaagctgcagaatacatc
agtggaaccttcacaaaacccatcaaactagagttcgagaaggtttattatccctatctt
ttgatcagcaagaaaagatatgctggtttattttggacaaatccacaaaagtttgacaaa
atggacactaaaggcattgaaactgttcgaagagacaattgtttattggtcaaaaacctt
gtaaatgaatgccttcacaaattattgatcgatagagacattcctggtgcagttcaatat
gtcaagaatactatttcagatcttctcatgaatcgaatggatttatcacttttggttatt
actaagggtcttacaaaaactggagatgattatgaggtaaaagccgctcatgttgaactt
gctgaacgcatgcgcaagcgagatgctgctactgctccaaatgttggtgatcgggtgcca
tatgtcattataaaagctgcaaaaggcgccaaggcttatgagaggtcagaggacccaatc
tatgtgctagaaaataacatccccatcgatcctcaatactatcttgaaaatcaaattagc
aagcctcttttaagaatttttgagcccattttgaagaatgccagcaaggaacttctccat
ggaagtcacacaagatccatttccatctcaactccttcaaacagtggaataatgagattt
gcaaagaaacaacttagttgcattggctgcaaggcactaattagcaatacagatcgaaca
ctctgttctcactgcaagggaagagaggcagaactttactataaaacagtttctcaagtg
tcagagctagaggagctttttgggaggctatggacacagtgccaagagtgccaaggctct
cttcaccaggatgtgctctgcactagtcgggattgtccaatattctaccggagaaagaaa
gcacagaaagatatggtagaagccaagcggcagttggacagatggaacttttaa
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integrated database retrieval system
