Theobroma cacao (cacao): 18594334
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Entry
18594334 CDS
T02994
Name
(RefSeq) uncharacterized LOC18594334
KO
K03504
DNA polymerase delta subunit 3
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03030
DNA replication
tcc03410
Base excision repair
tcc03420
Nucleotide excision repair
tcc03430
Mismatch repair
tcc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
18594334
03410 Base excision repair
18594334
03420 Nucleotide excision repair
18594334
03430 Mismatch repair
18594334
03440 Homologous recombination
18594334
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tcc01009
]
18594334
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tcc03032
]
18594334
03400 DNA repair and recombination proteins [BR:
tcc03400
]
18594334
Protein phosphatases and associated proteins [BR:
tcc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
18594334
DNA replication proteins [BR:
tcc03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
18594334
DNA repair and recombination proteins [BR:
tcc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
18594334
MMR (mismatch excision repair)
DNA polymerase delta complex
18594334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
18594334
NCBI-ProteinID:
XP_007021915
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All DBs
Position
7:7797246..7802360
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AA seq
528 aa
AA seq
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MSQIETLGILEEIQALVSDKLQVVSYKWLSRNFLVSSNVAKRLLAEFVEKHGSGLEVVYS
LSGWLKNTPSNYHIQLVSGPKLAEAKQEYDGNCRVHVYSVQACIPKDPAALWNTEFIQAE
ELFKQPTTADNCLRDNRFCGILTSFVKRNVNGTSVRVAAVQPKSVGISGPPKHNSAQNNA
ALPSQQNKVQQSSLKVAQQPPSVVKDVKSNSTDIGVHDPASKPSADKEQISSLSSNKKKD
QNDKSSTASGGSLANLWGRASTKPKPSCVPADDSDSIQNRNVSADAQICAREAVEDENSD
DGAQDVNFRRASNGEGNRKRRVVFDFSDEDEYEDAVNLASPDPPKGKSSFDSEQNSKTLV
PKIPNLIVDEPKKDEIKVKEEKTTNREPKSSSKSTTGGHSSLVKVENQLPETDAKDKVID
AAPNSPKRRKVMKTRIDDRGREVTEVVWEGEETEVKVESDMPRKVGSGTPNADNNTVTNT
NNRPPAAKKSPALGNTAPSNPGGKAGNKKAGNAKDPKQGNILSFFKRV
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaaattgaaaccctaggtattctcgaagagatccaagctctcgtctccgataaa
cttcaagtagtgtcctacaagtggctgagtcgtaattttctggtgtcatctaatgtagcg
aaaagattgcttgctgagtttgttgagaaacatggaagtgggttagaagttgtatatagt
ttgtctggctggttgaagaacactccatcaaactatcatatacagcttgtgtcagggcct
aaacttgcagaagccaagcaagaatatgatggcaattgcagagttcatgtgtacagtgtg
caagcttgcatcccaaaggacccagctgcactttggaatactgaatttatacaagctgaa
gagctcttcaagcagcccaccacagcagataattgcttgagagataacaggttctgtggg
atattaacttcatttgtcaaacgcaacgtcaatggaacttccgtaagggttgcagctgta
cagccaaagagtgtaggaatctcaggaccgcccaaacataattctgctcaaaacaatgca
gctttaccatctcaacaaaataaagttcagcaatcaagcttaaaagttgctcagcagcct
cccagtgtggtaaaagatgttaaaagcaacagtactgacataggagtccatgatccggcc
agcaagccttctgctgataaagaacaaatttcttccttgtcttctaataaaaagaaagac
cagaatgataaaagctccactgcaagtggaggttcattagcaaatttatggggtcgtgca
tctacaaaaccgaagcctagttgtgtgccggcagatgatagtgattccatccaaaatcgc
aatgtgagtgcagatgcacaaatttgtgctcgtgaagcagtagaggatgagaacagtgac
gatggtgctcaagatgttaattttaggagagcttctaatggtgaaggcaatagaaaacgg
agggtagtttttgatttctcagatgaggatgagtatgaagatgctgtcaatctagcttca
cctgatccccctaaagggaaatcatcttttgattctgaacaaaattctaaaactttggtt
ccaaagatacccaatttgattgtagacgagccaaaaaaagatgaaataaaggtcaaggaa
gagaaaactactaatagagaacccaaaagctcaagcaaaagcacaactggtggacattcc
tctttggttaaggttgaaaaccagcttcctgaaactgatgcgaaggataaagtgattgat
gccgctccaaattcacctaaaaggagaaaagtgatgaagacacgaattgatgaccgagga
agagaagtaactgaggtagtctgggaaggtgaggagacagaggtgaaagttgaaagtgac
atgcccaggaaagttggaagtggaacacccaatgctgacaacaatactgtcacaaatact
aataacaggcctcctgcagccaagaagtctcctgcacttggaaacactgcaccatctaat
ccaggaggtaaagctggaaacaagaaagctggaaatgcaaaggatcctaagcaagggaac
attctatcgttcttcaaaagggtttga
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