KEGG   Theobroma cacao (cacao): 18594588
Entry
18594588          CDS       T02994                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 8B
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
tcc  Theobroma cacao (cacao)
Pathway
tcc03020  RNA polymerase
tcc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tcc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    18594588
  09124 Replication and repair
   03420 Nucleotide excision repair
    18594588
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tcc03021]
    18594588
   03400 DNA repair and recombination proteins [BR:tcc03400]
    18594588
Transcription machinery [BR:tcc03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     18594588
  RNA polymerase III system
   RNA polymerase III
     18594588
  RNA polymerase I system
   RNA polymerase I
     18594588
DNA repair and recombination proteins [BR:tcc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      18594588
SSDB
Motif
Pfam: RNA_pol_Rpb8
Other DBs
NCBI-GeneID: 18594588
NCBI-ProteinID: XP_007022260
UniProt: A0AB32UYP8 A0A061F8X5
LinkDB
Position
7:10186876..10190686
AA seq 145 aa
MSSIIFFEDIFVVDKLDPDGKKFDKVTRIEARSQNCDMFMHLDVNSEIYPMHVGDKFTMA
LAHTLNLDGTPDTGYYTPGRKSLADKYEYVMHGKLYKVSDDGSGKGLKAEIYVSYGGLLM
MLRGEASHVSQFELDQRLFLLMRKL
NT seq 438 nt   +upstreamnt  +downstreamnt
atgtcaagcataatatttttcgaggatatttttgtggttgataagcttgacccagatggt
aaaaagtttgataaagttactcgtattgaagcccggagccagaattgtgatatgttcatg
catctagatgtgaattcagagatatatccaatgcacgtcggtgacaaattcacaatggca
ctagctcacactttgaacttggatggaacacctgacactggttattacactccggggagg
aagtctcttgcagataagtacgagtacgtcatgcatgggaagctatacaaggtatcagac
gatggttcagggaaaggacttaaagcggagatctatgtttcatatggcgggcttctaatg
atgctcaggggagaagcttctcatgtctcccagtttgaacttgaccagagactgtttctt
ctcatgaggaagctgtaa

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