Theobroma cacao (cacao): 18594593 Help Entry 18594593          CDS       T02994                                  Name (RefSeq) uncharacterized LOC18594593   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism tcc  Theobroma cacao (cacao) Pathway tcc03018   RNA degradation Brite KEGG Orthology (KO) [BR:tcc00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     18594593  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:tcc03019]     18594593 Messenger RNA biogenesis [BR:tcc03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      18594593   mRNA degradation factors    5'-3' decay     Decapping complex      18594593 SSDB OrthologParalogGFIT Motif Pfam:  PAT1 SPAR_C Motif Other DBs NCBI-GeneID:  18594593 NCBI-ProteinID:  XP_017980617 LinkDB All DBs Position 7:10264245..10272528 Genome browser AA seq 795 aa AA seqDB search MDASEDLKQFGDSSTGAAVFDASQYAFFGKDVLEEVELGGLDDEEAELPAVGLEQEEFLF DREEGEVLRSLSDIDDLASTFSKLNTAVSGPRGSGIIGDRGSRESSSVAEWAHGEEFRNW FDQQALETESIPEGKRWSSQPYSSVPNLDSEHLYRTSSYPEQQQQQLQHHHNQHFSSEPI LVPKSSYTSYPPPGGRSPQASPNHHSGHLNIPHMAGGSQMASSPNLSSFSNSQLQLPGLH HGSHYAGNMPQFPPGLSVNNRPSNQWGSQPNLYGGDNTSVLNNMLQQQLSHQNGLIPSQL MPQLQSHQQRLQHPVQPSFGHLSGIQSQLFNPHLSPSPPLMNKFEAILGLGDLRDQRPKS AQRSRQNPRFSQQGFDNSGLKSDIGWPQFRSKYMSTDEIEGILRMQLAATHSNDPYVDDY YHQACLARKYAGAKLRHHFCPTHLRDLPPRARANTEPHAFLQVDALGRVPFSSIRRPRPL LEVDPPNSSAVSNNEQKVSDMPLEQEPMLAARVTIEDGLCLLLDVDDIDRFLQFNQLQDS GAQLRQRRQVLLEGLAASLQLVDPLGKNGHTDELAHKDDFVFLRIVSLPKGRKLLARYLQ LVFPGGELMRVVCMAIFRHLRFLFGGLPSDPGAAETTNNLARVVSSCVHGMDLRALSVCL AAVVCSSEQPPLRPVGSPAGDGASLILKSVLDRATKLMIDFRAAGNYNMTNQSLWKASFD EFFNLLTKYCVNKYDTVMQSLRLQVKPDMAIDESDATRAIKREMPVDLLHACLPHINDQQ KKLIWDLSQRSVLVE NT seq 2388 nt NT seq  +upstreamnt  +downstreamnt atggatgcttctgaggatcttaagcaatttggcgattcttccacaggagctgcagtattt gatgcatcacaatatgcgttttttggaaaagacgttcttgaggaagttgaattgggggga ttagatgatgaagaggcggaattaccagcagtcggacttgaacaggaggagttcttgttc gatcgagaggagggtgaggttttgagatccttatcagacattgatgatcttgctagtaca ttttcaaagttaaacacagctgttagtggaccaagaggctcagggataattggtgatagg ggatccagagaaagttcatctgttgctgaatgggcacatggggaggaatttcgtaactgg tttgatcagcaggctcttgagactgaaagtattccagaaggcaaacgctggtcatcacaa ccatattcttctgtgcccaatttggactcagagcatctgtacaggacatcctcataccct gagcagcagcagcagcagctgcaacaccatcacaatcaacatttctctagtgaaccaatt ctagttccaaaatcttcttacacttcttaccctccccctggtggcagatctccacaagct tcaccaaaccaccattctggtcacctgaatattccgcatatggctggtggatcacagatg gcttcttcgccaaacctctcttccttctctaattctcagcttcaattgccaggtttacat catgggtcacattatgctgggaatatgcctcaattccctcctggtttgtctgtcaataat cggccgtcaaatcaatgggggagccagccgaacttatatggcggagataataccagtgtt ttaaacaatatgttgcaacaacagttatctcatcaaaatggtttgattccatcacaatta atgccacagctgcagtcgcaccagcagagactccaacatcctgttcagccatcatttggc catttgtcagggatacagtcgcaactatttaatcctcatctttccccatccccacctcta atgaacaagtttgaagctatacttggtcttggtgatctgagagatcaaagaccgaaatca gctcaaagaagtaggcagaatccacgattttctcagcagggctttgataacagtggactg aagagtgatattggatggcctcagtttagatccaaatacatgtctactgatgagattgag ggcattcttagaatgcagcttgctgcaactcacagtaacgatccttatgtggatgattat taccaccaggcttgtcttgcaagaaaatatgctggggcaaagttgagacatcatttttgc ccaactcatcttagggatcttcctccccgagcacgtgctaataccgagccacatgcgttt ctccaggttgatgctcttggaagggttcctttctcttcgattcgcaggcctcgccctctt cttgaagttgaccctccaaattcatctgctgtcagcaacaatgaacagaaagtttctgat atgcccctggaacaggaaccaatgcttgctgctagagttacaatcgaggatggtctatgc cttcttcttgatgtagatgatattgaccggtttttacagtttaatcagttgcaggatagt ggagcacagctgagacaaagacgacaggttttgttggaaggcctggctgcatcacttcaa ttggttgacccacttggcaagaatggtcatacagatgagcttgctcataaggacgatttt gtatttttacggatagtttcccttcccaaaggccggaagctgcttgcaagataccttcag cttgtttttcccggtggtgagcttatgcgagttgtctgcatggccattttccgtcattta aggttcttgtttggaggcctaccctctgatccaggagcagcagaaactacaaataacctt gcaagggttgtctcgtcatgtgttcatggcatggatcttcgtgcacttagtgtctgtctt gcagctgtggtttgttcctcagagcagccccctcttcgtccggttggaagtcctgctgga gatggggcatctcttattcttaagtctgtccttgatagggcaacgaaactcatgattgat tttagagctgctggcaattataatatgaccaatcagtccctttggaaggcctcatttgat gaattttttaaccttcttaccaagtattgtgtaaacaaatatgatactgtgatgcagtcc ttgcgtttgcaggtcaaaccagatatggcaattgatgagtcagatgctaccagagctatt aaaagggaaatgccggttgatcttttacatgcatgtttaccccacattaatgatcagcag aaaaagctgatatgggatctctctcagcggtctgtgcttgtagaatag

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