Theobroma cacao (cacao): 18595057
Help
Entry
18595057 CDS
T02994
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tcc01009
]
18595057
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcc04131
]
18595057
Protein phosphatases and associated proteins [BR:
tcc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
18595057
Membrane trafficking [BR:
tcc04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
18595057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
18595057
NCBI-ProteinID:
XP_017978823
UniProt:
A0AB32WL26
LinkDB
All DBs
Position
6:349122..369666
Genome browser
AA seq
1003 aa
AA seq
DB search
MDPQPSPSGRSSPVGRSPSFSVTDAGSQSLSSILNNPHAARLEASWVGWWSVSPPEFAPL
ISTKASSDLTRSDFQSYVSSVSDSYHRFEDIRNHSTKEQTLDVDNIGEALVACLREVPAL
YFKEDFALEDGPTFRAACPFTDVSENIVLQEKLSHYLDVVELHLVKEISLRSNSFFEAQG
QLQDLNVKIVEGCSRIRELKETIRLLDTDLVDSARQIQELNANRTNLFALQHKLKLILSV
NQALSALKLLVASAECAGALDVIDDLQHLLDGDELTGLHCFRHLRDHVVASIDSINSILS
AEFMCASIHDTGDADAVILLKAKARASSSLNGKDVEQVKLDEEETTNFRDRLLPLIIGLL
RTAKLPFVLRTYRDTLTADMKTAIKTAVAELLPVLVARPLESDLTAERSMDIDGGGSSLA
SKLRSLSSESFVQLLAAIFKIVQAHLVRAAEVKRAIEWIMCNLDGHYAADSVASAIALGA
MVAESSQESNGQGGPLLPYAPLRSTAKALSSPGKASDAISPSNLSKNFRADVLRENTEAV
FAACDAAHGRWAKLLGVRALLHPRLRLQEFLSIYNITQEFITATEKIGGRLGYSIRGTLQ
SQAKSFVDFQHESRMTKIKAVLDQETWVEVDVPDEFQAIVSSLLHSEAIISGNKDNAETN
MTSYSDMVASNEGSQVADTGLQGALEQQEQTDSSGATALNAAQGKAEAIEKMKSDSVTSS
QSNSSNMKERGKPTTQMLEYGGVGYHMVNCGLILVKMLSEYIDMNHLLPSLSLEVVHRVV
EILKFFNTRTCQLVLGAGAMQVSGLKSITSKHLALASQVISFTYAIIPEIRQILFLKVPE
PRKSLLLLEFDRVAQDYKVHRDEIHTKLVQIMRERLLVHLRGLPQIVESWNRPEDAEPQP
SQFARSLIKEVGYLQRVLSRTLHEVDVQAIFRQVVVIFHSQISEAFSRLEITTPQAKDRL
HRDIKHILGCIRSLPTDNLNNSATPNWGQLDEFLVQRFGAEAG
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atggatccgcagccttccccatcgggaaggtcgtccccagtaggtcgaagcccttcattc
tccgtgaccgatgcgggtagccaaagtctctcttcgatcctcaacaaccctcacgctgcc
agattggaggcctcttgggttggttggtggtccgtttctcctcccgagttcgcgccctta
atttcaaccaaagcctcctccgacctcacacgatccgacttccaatcctacgtctcttcc
gtctctgactcctaccatcgcttcgaggacattcgcaaccactccaccaaggagcaaacc
ctcgatgtcgacaacattggggaggccctcgtcgcttgtttgagggaggtcccggcactc
tattttaaggaagatttcgcactcgaagatggacccactttccgggcagcctgccctttc
accgatgtttctgaaaacattgtgcttcaggagaagttgtcacactacctggacgtggtg
gagctgcatttggtcaaggagatttcgctgcgctccaattctttctttgaagcgcaaggg
cagttgcaggacttgaatgttaagattgtggaaggttgcagtcggattcgcgagttaaag
gaaactattcggcttttagacactgatttggttgactctgctaggcagattcaggagttg
aatgccaataggaccaatttgtttgcactccaacataaattgaagcttattctatctgtt
aaccaagcgttatccgctcttaaattgcttgttgcatctgcagagtgtgctggagctttg
gatgttattgatgacctgcagcacttgttggatggggatgagcttactggtttacattgc
tttcgtcaccttcgagatcatgtagtggcttctatagattccataaacagcattctttcg
gcagaatttatgtgtgcttcaatacatgatactggagatgcggatgcagttatattgttg
aaagcaaaagccagggcatccagttccttgaatggaaaagatgttgaacaggttaagttg
gatgaggaggaaaccactaattttcgagatcgtcttctgcccctcatcattggtttgctt
cgaacagccaagctcccctttgtcctgaggacatatcgtgatacacttactgctgatatg
aaaactgctattaagactgctgttgcagagctgcttcctgttcttgttgctcgacctctg
gagtctgatttaactgcagagcgttctatggacatagatggtggaggctcatcacttgca
agcaaattgaggagcttgtcatctgaaagctttgttcaacttttggctgctattttcaag
attgtacaggcacatttagtgcgggctgctgaagtgaaaagggccattgagtggataatg
tgcaaccttgatggtcattatgctgctgattcagttgcttctgcaattgctcttggtgcc
atggtggcagaatcttctcaagagagtaatggtcaaggtggtccacttcttccatatgcg
cctttgaggagtactgccaaggctctttcatccccagggaaagcaagtgatgcaataagc
ccctctaatttgtcaaaaaatttcagggctgatgttttaagagaaaacactgaagcagtc
tttgcagcttgtgatgctgctcatggaaggtgggcaaagctgcttggggttcgtgctctt
cttcatcctaggttgagattgcaagagtttttgagcatatataacatcactcaagagttt
ataactgctacagagaagattggcggaaggttgggatatagcatacgtggaacactacag
tcacaggccaaatcctttgttgatttccagcatgaatctcgaatgacaaaaataaaagca
gtgcttgaccaggagacatgggtagaagttgatgttcctgatgaatttcaggcaattgtg
tcttcactacttcattctgaagcaataatttctggaaacaaggataatgctgaaactaat
atgacaagctacagtgatatggttgcaagcaatgaaggttcacaagtggctgacactgga
ttacagggtgctttagagcaacaagagcagactgactctagtggcgcaactgcactcaat
gctgcccaagggaaggctgaggcgattgagaaaatgaaatctgattcagtaacttcatct
cagagtaacagtagtaacatgaaggaacgtggaaaacctactactcaaatgcttgaatat
ggaggtgttggttatcacatggtaaactgtggcttaatattggtgaagatgctgtcggag
tacattgacatgaatcatcttttgccatcactgtccttggaagtggttcatcgtgttgtg
gagattttaaaatttttcaatacgagaacttgccaacttgtcctgggtgctggagccatg
caggtttctggtttgaagtccattacttctaaacatttggccttggcaagtcaagtcatt
agtttcacatatgctattattcctgaaatcaggcaaatcctgtttctgaaagttcccgag
cctcgaaagtcactattgttgttggagtttgatcgagtagcacaggattataaggttcat
cgtgatgaaatacatacaaagcttgttcagataatgagagagaggttgttggttcatctg
cgtggactgccccagattgttgaaagctggaataggccagaagatgctgaaccacagccc
agtcaatttgctcgatcccttataaaggaagttggctacctccaacgtgttttatctcga
acattgcatgaagtagacgttcaagcaattttcaggcaagttgttgtaatcttccattcg
caaatttcagaagcattttcacgcttagagatcaccactcctcaggcaaaagataggctg
catcgtgatattaaacacattcttggatgcattcgatcattgccgactgataatttgaac
aattctgctacccctaactgggggcaactggatgagtttctagtgcaaaggtttggggca
gaggctggttga
DBGET
integrated database retrieval system
