Theobroma cacao (cacao): 18595402
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Entry
18595402 CDS
T02994
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
18595402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcc03019
]
18595402
03036 Chromosome and associated proteins [BR:
tcc03036
]
18595402
Messenger RNA biogenesis [BR:
tcc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
18595402
Chromosome and associated proteins [BR:
tcc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
18595402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
18595402
NCBI-ProteinID:
XP_007023385
UniProt:
A0AB32UZI2
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All DBs
Position
6:3590687..3600915
Genome browser
AA seq
1069 aa
AA seq
DB search
MASASFLPASGTLSEIDNTTSDKSTSGTLFDVENCDLQITSLYKKRSLSTTTDFLSHYVS
RKIKESLPSLHSSDYYMEPSLKDMVTLELMDPGFCSRIPDFVVGRIGYGCVKFFGNTDVR
GLNLDQIVKFHRHEVIVYEDESNKPMVGQGLNKTAEVTLRLQLKHLILEKQEVDGIVKKL
GESMTRQGAQFIAFDPANGEWKFLVDHFSRFGLSEDEEEDIIMDDATGVVQDPGEMNGGE
NSGIDEDMQIDTNGLVLSHSLPAHLGLDPLKMKEMRMLMFPVEEEEEIEDFRGAASHQKP
AFGKEYIRSPLHNSNQRMSHRSSPPVVRKTPVALLEYNSGNFDSSSSGNVLMVQENKGMP
LKTVKKEGFKLDLKQETPVTGSHSRNIVDAALFMGRSFRVGWGPNGILVHSGAPVGSNDS
QRVLSSVINIEKVAIDKVVRDENNKVKKELIDFAFDAPLNLHKALNYEEKELEVGYFKLK
LLKVVSNRLELSEICRSYIDIIERQLEVPGLSLSARLVLMHQVMVWELIKVLFSERENTA
HLKSMGADNEEDEMQDIKEGPPEVDLESLPLIRRAEFSCWLQESVCHRVQEGISSVNDSG
YLEHLFFLLTGRQLDAAVELAASKGDVRLACLLSQAGGSTVNRSDVARQLDIWKINGLDF
KFIEKDRIRLYELLAGNIVGAMHGVKIDWKRFLGLLMWYHLPPDTTLPTVFQTYQQLLDD
GKAPYPVPIYVDEGPVEENANWSRVERFDLSYHLMLLHASEESQLCSLKTMFSTFSSTHD
PLDYHMIWHQRAILEAVGAFCSNDLQALDMGLISQLLCQGQCHWAIYVALHMPYRDDYPY
LQAILIREILFQYCESWSSQGSQRQFIEDLGVPLQWLHEAMAVYFNYHGDLPKALEHFLE
CASWQKAHSIFMTSVSHALFLSANHSEVWRIATSMEDHKSEIENWDLGAGIYISFYVVRS
SLQEDNNTMGELDSLDSKNAACRDFLGRLHESLAVWGGRLPVDARVAYSKMAEEICDLLL
SEISEGPTRDDQLSCFDTVFSAPIPEDLRSNHLQDAVTLFTCHLSEVAS
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgcttcttttctcccggcttcagggactttgagtgaaattgacaatacaaca
agtgataaatctacaagtgggacgctctttgatgtggaaaattgtgatttacagattaca
tcactatacaagaagagaagcctttctacaactactgattttttgtcacattatgtttca
agaaaaattaaggaatctttacctagtttgcattcctctgattattatatggagccttcc
ttgaaagatatggtaacattggaactcatggatcctggtttctgcagccgcattccagat
tttgtggttggaagaattggctatggttgtgtaaaattttttggaaatactgatgttaga
gggttgaatctagatcaaattgtgaagttccataggcatgaggtgattgtatacgaagat
gaaagtaataagcctatggttggtcaaggccttaacaagactgctgaggtaactttgagg
cttcaacttaaacatttaatcttggaaaaacaggaggtagatggtattgttaagaaatta
ggagagagcatgacgaggcaaggggcacaattcattgcatttgacccagcaaatggtgaa
tggaaattcttggttgaccatttcagcagatttggactgagtgaagatgaggaggaagat
attataatggatgatgcaacaggggttgtccaagatcctggggaaatgaatggtggtgag
aattctgggattgatgaagatatgcaaatagatactaatggactggtgctttctcattct
ctgcctgcacatcttgggcttgacccattgaagatgaaagaaatgagaatgttgatgttt
cctgttgaggaagaagaggagattgaggattttagaggggcagcttctcatcagaaacca
gcctttggcaaagaatacataaggtctcctctgcataactctaatcagaggatgagtcat
aggtctagcccacctgttgtacggaaaaccccagttgctttgcttgagtataattctggt
aattttgattcaagctcatctggaaatgttctgatggtacaagaaaataagggcatgcct
ttaaagactgttaaaaaagaaggtttcaagctggacctcaagcaagagacgcctgtcact
ggtagccattctagaaacatagttgatgcagcattgttcatgggtagatcatttcgtgtg
ggttggggcccaaatggcattcttgtccactctggtgcacctgtaggtagtaatgactcc
cagagagtattgtcttctgtaatcaatatagaaaaagtggcaattgataaagtagttaga
gatgaaaataacaaagtaaagaaagaacttattgactttgcttttgatgctccattgaat
cttcacaaggccctaaattatgaagaaaaagaattggaagttggatactttaagttgaag
cttctgaaggttgtctctaatcgcttagagctctctgagatttgtaggagctatatagac
attattgagaggcagttggaggttcctggtctgtctttgtctgctcgcttggttttgatg
catcaagtaatggtctgggaattgataaaagttcttttttcagaaagggaaaatactgct
catctgaaatctatgggtgctgataatgaggaagacgagatgcaagatatcaaggaaggt
cctccagaagttgacctggaatcactgcctcttattcgaagggcagagtttagttgttgg
ctgcaagaaagcgtttgtcaccgtgtacaagaaggaataagctcagtgaatgattcaggt
tatttggaacacttattctttctcttgactgggcgacaattggatgcagctgtggagctg
gctgcttctaaaggagatgttagactggcttgtttactaagccaggctggtggatcaaca
gttaatcgttctgatgttgcacggcagcttgatatttggaaaattaatgggctggacttc
aagttcattgagaaggatagaattcggctttatgagttgcttgctggtaatatcgttggt
gctatgcatggtgttaagattgactggaagagattcttaggattgttgatgtggtatcac
ctaccaccagatactacattgcccactgtttttcaaacttatcagcaacttcttgatgat
ggaaaagctccatatcctgttccaatttatgttgatgaaggacctgtcgaagagaatgca
aattggagtagagtggaacgatttgatctttcataccatcttatgcttctgcatgccagt
gaagagagtcaattatgctccctgaagacaatgtttagcacattctcttcaacacacgat
ccgcttgactaccatatgatctggcatcagcgggctatcttggaggctgttggtgctttc
tgttctaatgatcttcaagctcttgacatgggacttatatcccagttgctatgccagggg
cagtgccattgggctatctatgtagcccttcacatgccctaccgtgatgattatccttat
cttcaagccattcttatccgggaaattttgttccaatattgtgaatcttggagttcacaa
ggatcacaacgccaatttatcgaggacttgggtgttccattgcaatggttgcatgaagct
atggcagtttattttaattatcatggggatttgccaaaggctctcgagcactttctggaa
tgtgcaagttggcaaaaagctcattctattttcatgacttcagtatctcatgcgttattc
ttgtctgccaatcactctgaggtgtggaggattgcgacgtcaatggaggaccacaagtca
gaaattgaaaattgggacttgggagctggaatttatatttcattctatgtagtaagaagt
tcattgcaggaggacaacaatactatgggtgaactggattctcttgacagcaaaaatgca
gcttgtagggactttcttggtcgtttgcatgagtctttggcagtttggggtggcaggtta
ccagttgatgcaagagtggcttattcaaagatggcggaggagatatgtgatttgttgctt
tctgagattagtgagggtcctacgcgtgatgaccagttaagctgctttgataccgtcttc
agcgcccccattcccgaagaccttcggtcgaatcatttgcaggatgcggttacactattt
acttgtcatctttcagaagtggcgagttag
DBGET
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