Theobroma cacao (cacao): 18595536
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Entry
18595536 CDS
T02994
Name
(RefSeq) YTH domain-containing family protein 2
KO
K20102
YTH domain-containing family protein
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcc03019
]
18595536
Messenger RNA biogenesis [BR:
tcc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
18595536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
DUF3942
Motif
Other DBs
NCBI-GeneID:
18595536
NCBI-ProteinID:
XP_007023597
UniProt:
A0AB32UYR3
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Position
6:5768843..5775716
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AA seq
647 aa
AA seq
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MDAEEQHADPENVKEQPLSTKNETSVSPNSSQDAAPLGHPRSGASQSVSFGSGGDRNVYS
PTIYAPQAQAFYYRAGYDNAAGEWDEFPPYVNPEGLELGSSGVYNDNPSLVFHTGYGYNP
QMPYGPYSPVTTPLPSIGGDAQLYSPQQFPFSGPQYYQQLVPPSMPYITSPTPVSQPELT
TLVNVDQQGDNMLFGPRPSYPTPLGSFGRGSFPGNPGAVGFNDLPQGFDGLRSGGLWSDW
SKPSDRQRSLTPISPAVSPQPIGPIGHNVAMASQQQRSFYRLESGMNSYNRGYLQSGLNQ
GPSFGSASVPSLGANSRGWLSLDSNRRRGRGSGLSLCGCNGALDILSEQNRGPRASKPKN
QITAEHNSSIDDNKNNKPSAKIHDESFNRPDFATDYKDAKFFIIKSYSEDNVHKSIKYGV
WASTPNGNKKLDAAYREAKENQDTCPVFLFFSVNASAQFCGVAEMVGPVDFDKSVDYWQQ
DKWSGQFPVKWHIIKDVPNSQFRHIVLENNDNKPVTNSRDTQEVRLEHGIEMLNIFKNFD
TDMSILDDFDFYEDRQKAMQERKARQQASLMSVGVVGESEHRNTVTLSNDFIIKQMSKSF
AQVVALDDGNKESTTIERTNAASDGSKGGRVNLEDAITAAVSSAQAS
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagaagagcaacatgctgatccagaaaacgtgaaggagcagcctctttcgaca
aaaaatgagacgtcagtttctcctaactcctcccaggatgctgcccctctaggtcatcca
aggagtggtgctagccaatctgtatcctttggttcaggtggagatcgtaatgtctactca
cctacaatctatgcccctcaggcacaggctttctattacagagcaggctatgacaatgct
gctggcgaatgggatgaatttccgccatatgtcaatcctgaaggactggaacttgggtct
tcaggtgtctacaatgacaatccatcacttgtcttccacactggatatggctacaatcca
caaatgccatatggaccatattccccagtcacaactcctttgccttctataggtggtgat
gcacagttgtactccccacagcaatttcctttttctgggccacaatattatcagcaacta
gttcctccgagtatgccttatattacttcacctactccagtttcacaaccagagctaacc
accttagttaatgttgaccaacaaggtgataacatgctttttggaccaaggcctagttat
cccactccattgggatcttttggtagaggcagtttccctggaaatcctggtgccgtagga
tttaatgacttaccgcaaggatttgatggattgaggtctggaggactttggtcggattgg
tcaaagccttctgacagacagagatctttgactcccatttcgccagcagtgtctccccag
ccaatcgggccaatcgggcataatgttgcaatggcctctcagcagcaaaggtcattttat
cgattggaatctggtatgaactcctataacagaggctacctgcaaagtggtctcaaccaa
ggccctagttttggaagtgcatcagttcctagtttgggagcaaacagtaggggctggttg
tctcttgatagtaacagaagacgtggaaggggcagtggcctctctctatgtggttgtaat
ggtgctctcgatatccttagtgagcaaaaccgaggaccaagggcctcaaaacctaagaat
caaatcacagctgaacacaattcttccattgatgataataaaaacaacaaaccttcagcc
aagatccatgatgagtcattcaacaggccagatttcgctactgattacaaggatgctaag
ttctttataatcaagtcatacagtgaagataatgttcacaagagtattaaatacggtgtc
tgggctagcacacctaatgggaacaaaaaattggatgctgcttatcgtgaggccaaggag
aatcaagatacttgtccagtgtttctcttcttttcggtgaatgccagtgctcagttctgt
ggggttgctgaaatggttggacctgttgattttgacaagagtgtcgattactggcaacaa
gataaatggagtgggcagttccctgtcaagtggcatattatcaaagatgttccaaacagt
cagttccgtcacattgtactggaaaataatgataataagccagtgactaacagtagagac
actcaggaggtgagattggaacatggaattgagatgttgaacatcttcaaaaattttgat
actgatatgtcaatcctggatgattttgacttctatgaggaccggcagaaagccatgcag
gagcgtaaggctagacaacaagctagcctcatgtctgtcggggttgttggagaaagtgag
cacagaaatactgttacattatccaatgatttcatcataaagcagatgtctaagagtttt
gctcaagttgttgccttggatgatggtaataaagaaagcactactattgagagaactaat
gctgcttctgatggttcaaaaggtggaagggttaaccttgaagatgctatcacggcagct
gtctcttctgctcaggcaagctag
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