Theobroma cacao (cacao): 18595582
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Entry
18595582 CDS
T02994
Name
(RefSeq) pumilio homolog 5
KO
K17943
pumilio RNA-binding family
Organism
tcc
Theobroma cacao (cacao)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
NABP
Ku_PK_bind
Motif
Other DBs
NCBI-GeneID:
18595582
NCBI-ProteinID:
XP_017978935
UniProt:
A0AB32WJK7
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All DBs
Position
6:complement(6734390..6747576)
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AA seq
1005 aa
AA seq
DB search
MATESPMRMIESSGATKWHSSKDALVFGLPLKDMEVEELRLLLKEQRIHGDQTDTVPNRS
GSAPPSMEGSFAALGNLLAQQNNSLTSSLASLSSVIENCESEEQLRSDPAYFAYYSSNIN
LNPRLPPPLISRENRRLARHIGGFGNNWRARSIDDSGSGSLMFYRSSLSTHGEESEDDRS
PRQASDKWPEDSTVSLPEQDSASLTGRHKSLVDLIQEDFPRTPSPVYSQSRSSGITATEE
TIDHDVHAISSNFPSINASEVPDSNFGSTDVCMDTSALDAHTIALISQNDSLETSIPGQP
CSEQTGRLPGPQKEDTSLKDASLDADASDNVQQSVVSTVESRMRKKQEAQQSHGRNIPQH
YSSIQPGSPHQAQGVPAQGFSQGLSHLYSHPKFSSPESQPLLHSSGLTPPMYATAAAYVT
SGNPFYPNFQPSGVYGPQYDVGGYAVSPALFPPFMPGYPSHSAIPLTFDSTVSGSSFNNR
TSGASTGETTPHSSGLQHLGHFYGQHGLMLPPSLVDPLHMQYLQHPFNNVFGASVQRGHL
ASTGVTGGQVDSFVQKESTVAAYIGDPKLQPPINGSLSIPNPGKVGAIGGSYGGHPSMGV
IAQYPSSPLASPLMPSSPVGGMSPLSRRNEIRFPPKAVPYSGWHGQRGFNSFEDSKRHSF
LEELKSSNARKFEISDIAGRIVEFSVDQHGSRFIQQKLEHCSVEDKESVFKEVLPHASRL
MTDVFGNYVIQKFFEHGSSEQRKELADQLVGNMLNFSLQMYGCRVIQKALEVIELDQKTQ
LVQELDGHIMKCVRDQNGNHVIQKCIECVPTYRIGFIISAFRGQVATLSTHPYGCRVIQR
VLEHCSDEMQSQCIVDEILDAAFDLAQDQYGNYVTQHVLERGKPHERSHIISKLTGKIVQ
MSQHKYASNVVEKCLEYGDSTERELLVEEIIGQSDENDTLLTMMKDQFANYVVQKILDIS
NDRQREVLLGRVRVHLNALKKYTYGKHIAARFEQLFGEESDESGH
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgagagcccaatgagaatgatagaaagtagtggagccacaaagtggcactcg
tcaaaggatgctttagtatttggtttgccattgaaagatatggaagtagaggagttgaga
ctgcttttgaaagagcaaagaatccatggagatcagacagacacagtgccaaatcgaagt
ggtagtgctccgccaagtatggagggttcatttgcagctcttggcaaccttttggctcaa
cagaacaatagtctgacttcaagcttggcaagtttgagcagtgtcattgagaattgtgag
tctgaggaacaactgcgctctgatccagcctattttgcctactatagctccaatatcaac
ttaaatccaaggcttccaccacctctcatctcacgtgaaaatcgtcgcttggcacgccat
attggtggttttggtaataattggagagcaagatctatagatgatagtggcagtggctcc
ttaatgttttatcgaagttcactttctacacatggggaggaatctgaggatgatagatcc
cccagacaagcttcagacaagtggccagaagatagcactgtgtctttgccagaacaagac
tcagcatctttgacaggtcggcacaagagtttggttgatctgatacaggaagacttcccg
cgcaccccttcacctgtatatagtcagtctcgttcctcgggcattacagcaacagaagaa
acaatagatcatgatgttcatgcaatctcgtctaattttccttctattaatgcttcagaa
gtaccagattcaaactttggttctactgatgtttgcatggatacaagtgccctggatgct
catactattgctttaatatcccaaaatgattctttagagacctcaattccaggtcagcca
tgttctgaacagacagggagattaccaggccctcaaaaagaagatacaagtttgaaagat
gctagtctggatgctgatgcgtccgacaatgttcagcagtcagttgtgtctactgtagag
tcgagaatgagaaagaaacaagaagcacaacagtctcatggaaggaatattcctcaacac
tattcatccattcaaccgggttccccacatcaggcccaaggagttccagctcagggcttt
tctcaaggattgagtcatctgtatagccatcctaagttctcttctccagagtcacaacca
cttttgcattcttctggactcacacctccaatgtatgcaacagcagcagcgtatgtgact
tctggaaatccattttaccctaattttcagccatctggtgtgtatggtccacaatatgat
gtaggtggatatgctgtgagtcctgcactttttcccccatttatgcccggatacccttct
cacagtgctattcctttgacatttgattctactgtgtctggttcaagcttcaataatcgt
acttctggtgcttcaactggggaaaccactccacattcaagtggtttgcagcatctgggc
cacttttatgggcagcatggattaatgctgccaccttccttagttgatccgcttcatatg
caatacctccaacatccttttaacaatgtatttggtgcttcagttcagcgtggtcatttg
gcatcaactggtgttactgggggccaagttgattcttttgtgcagaaagagtcgactgtg
gctgcttatattggcgatccaaaacttcaacctccaattaatgggagcctaagcattcca
aatcctgggaaagttggagctattggtggtagttatggaggtcatccaagcatgggtgtc
attgcccaatacccatcatcacctcttgctagtccactgatgccatcatcaccagtaggt
ggaatgagtcctctaagccgcagaaatgaaatcaggtttcctccaaaagctgtaccatat
tctggatggcatggacagagaggattcaacagctttgaggactccaaaaggcattctttt
ctcgaagaactgaaatccagcaatgcccgaaaatttgaaatctctgatatagctgggcgt
atagttgaattcagtgttgatcaacatgggagtcgttttatccagcaaaagctggagcat
tgcagtgttgaggacaaggagtctgttttcaaggaagtccttccacatgcttcaagatta
atgaccgatgtttttggtaattatgttattcaaaagttttttgaacatggaagttctgag
cagcgaaaggaacttgcagatcaacttgttggaaatatgttgaactttagtctgcaaatg
tatggttgtcgtgtgatacagaaggcactagaagtgatcgagcttgatcaaaaaacacaa
cttgtgcaagagcttgatggccacattatgaaatgtgtgcgtgatcaaaatgggaatcat
gtgatacaaaagtgtatagagtgtgtccccacctatagaattggatttattatttctgct
tttcgtggccaagttgccacactttctactcatccctacggttgccgtgtcatccaaaga
gttttggagcattgttcagatgaaatgcaaagtcaatgcatagtggatgaaattttggat
gctgcttttgatcttgctcaagatcagtatggcaactatgttacacagcatgttctggag
cggggaaagccacatgaaagaagccacattatcagcaagttaactggaaaaattgtacaa
atgagtcaacataaatatgcgtcaaacgttgttgagaagtgcttggagtacggtgatagt
actgaacgagagcttttggttgaggagataattggacaatctgatgaaaatgacacttta
ttgactatgatgaaggatcaatttgcaaactatgtggtccagaagattcttgatatcagc
aatgatagacagcgggaagtattgctgggtcgcgtgagagtacatcttaatgctttgaag
aaatacacttatgggaaacacatagctgctcggtttgaacaactgtttggtgaagaaagc
gatgagtcgggacattag
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