Theobroma cacao (cacao): 18595762
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Entry
18595762 CDS
T02994
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
18595762
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tcc01002
]
18595762
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tcc04121
]
18595762
03036 Chromosome and associated proteins [BR:
tcc03036
]
18595762
03400 DNA repair and recombination proteins [BR:
tcc03400
]
18595762
Peptidases and inhibitors [BR:
tcc01002
]
Metallo peptidases
Family M67
18595762
Ubiquitin system [BR:
tcc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
18595762
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
18595762
BRISC complex
18595762
Chromosome and associated proteins [BR:
tcc03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
18595762
DNA repair and recombination proteins [BR:
tcc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
18595762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
Motif
Other DBs
NCBI-GeneID:
18595762
NCBI-ProteinID:
XP_007023913
UniProt:
A0AB32UZY8
LinkDB
All DBs
Position
6:complement(12917339..12923810)
Genome browser
AA seq
436 aa
AA seq
DB search
MSLTCVKMSEDVWLTCLTHALSTETEEIMGLLLGDIEYSKDGNVTALIWGASPQSRSDRR
KDRVETNPEQLAAASAQADRMTASTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLD
SGFIGLIFSCFSEDTNKVGRIQVIAFQSSDGKQSHASGPVALSPVNRSSVIDLESSLSSS
ENPLVTLGSAKVDSPLQDTGDSRLTLVSSKGGGRSVDLGGFFANADANYLGREQSEGNYN
ASNIQNAVVDIDPMDMSESMQEAMHRSNMDMSGAEYVRKEIPLHVLPTSSLVNLDSPLMS
FTDLQRVLYEEERAAYNQAILQNMRDGKVHPLSFIHHTSTYQASMCKLIEYCLSPAINAL
QDRLKENEIRLAMLTDEAKTLETEAVRGSGPSSPHHASSHGFRGSALVGQRELHNSAESI
SMRTYAGPGSRSRKRS
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaacatgtgtgaaaatgtctgaggatgtttggttaacttgtctcacgcatgca
ttgtctactgaaactgaagagatcatgggtcttcttctcggtgatattgagtactcaaaa
gatggaaatgtcactgcattgatatggggagcatcaccacaatcacgatcagatcggcgg
aaggaccgagttgagacaaatcctgaacaattggcagctgcatcagctcaagctgataga
atgacggcatcaactggcagaacaacaagagtgattgggtggtaccattcacatcctcat
ataacagttcttccttctcatgttgatgtgcggactcaggcaatgtatcaacttctagat
tctggatttattggactaatattttcttgttttagtgaagatacaaacaaggtgggaaga
atccaagtcattgcttttcagtcatcagatgggaagcagagtcatgcatcaggacctgtt
gctttatctccagtgaatagaagttcagtcatcgatcttgagtcatctttaagttcttct
gaaaatccattggtgacattgggatctgcaaaagtagatagtcctctgcaagacactggt
gattccagattgactctggtatccagtaagggtgggggacggtctgttgacttgggaggt
ttcttcgctaatgctgatgccaactatttagggagagagcaaagcgaaggaaactataat
gctagtaatatacagaatgctgttgttgatattgaccccatggatatgtcagaaagcatg
caagaagccatgcaccgctcaaacatggacatgagtggtgcagagtatgtcaggaaagaa
attcctcttcatgttttgccaacatcatctcttgttaatcttgactcaccattaatgtca
tttacggatttgcaacgtgtactatatgaagaggagcgggcagcatataaccaagccatc
ttgcaaaatatgagagacggcaaagtgcatcctctttcttttatccatcacacctcaaca
tatcaggcgtccatgtgcaagttaattgaatactgtttaagtcctgccatcaatgcactt
caggatcgattaaaagagaatgaaattcggttagcaatgctgactgacgaagctaagact
ttggagactgaagccgtcagggggagtgggccaagttctcctcatcatgcttcatctcat
ggattccgaggaagtgctttggttggtcagagagagttgcacaattcagctgagtccatc
agtatgaggacatatgctggtcctgggagccgaagcagaaaacgatcatga
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