Theobroma cacao (cacao): 18595998
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Entry
18595998 CDS
T02994
Name
(RefSeq) nuclear pore complex protein NUP35
KO
K14313
nuclear pore complex protein Nup53
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
18595998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcc03019
]
18595998
Messenger RNA biogenesis [BR:
tcc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
18595998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_Nup35
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
18595998
NCBI-ProteinID:
XP_007024271
UniProt:
A0AB32V0D5
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Position
6:complement(17979151..17982346)
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AA seq
329 aa
AA seq
DB search
MSTTVHRTPKSGRQSLFFQDLASPVSARRGKFSSPGQAAAVSALWRENFGGSDLPPPPMY
TLEDRSDFSPESGILDYPMSPEIKSDPRNPVQTSGRDFSTPAKSKSEASTSFSVLSGQQN
QQSPTSLSWWSPTKASGSEQDDKGKGSPVEGVVQPGALITLPPPREVARPEIQRNSIPAG
NLDEEEWVTVYGFSPADTNLVLREFEKCGVILKHVPGPRDANWMHILYQNRSDAQRALGK
NGMQINGVLIVGVKPVDPMQRQALDERLNNQGFMTLPPPASRSSELNNFRPSHPYYLQNG
NTNARQSGGAIANPTKSLGLKVMEFLFEY
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccacggttcatagaactcccaaatcagggagacaatcattgtttttccaagac
ttggcatcaccagtctctgcccggagagggaaattctctagtccaggtcaagcagcggct
gtctcagctttatggcgtgagaattttggaggttcagatcttccgccccctcctatgtac
accctggaggatcgttcagatttttctcctgaatctgggatattggattatcctatgtct
cctgaaatcaagtcagacccaagaaatccagtccaaacttctggacgtgacttctcaact
ccggcaaagagcaagtcagaggctagcacttcattttctgtactaagtgggcagcagaat
cagcagagcccaacgagtttgagttggtggtcacccacaaaggcaagtggcagtgagcag
gatgacaagggaaagggttctcctgttgagggtgtggttcagcctggtgctttgatcaca
cttccacctccaagggaagttgctaggccagaaatacagaggaattccatacctgcagga
aatttggatgaggaagaatgggttactgtttatggattttcacctgctgatacaaattta
gttttgcgagagtttgaaaagtgtggtgtgatattgaaacatgttcctggtccaagggat
gctaactggatgcacattctatatcagaatcgatctgatgctcagagggctcttggcaag
aatggaatgcaaattaatggagtgctgattgttggtgtgaagccagtggatccaatgcaa
cgccaggctttagatgaaagattgaataatcagggattcatgactttacccccaccagca
agtagatcatcagagctgaacaatttccgaccatctcacccttactatcttcaaaatggc
aataccaatgcacgacagtcaggaggtgctattgcaaaccctacaaaatcactggggttg
aaagtcatggagttcttgtttgaatattag
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