Theobroma cacao (cacao): 18596136
Help
Entry
18596136 CDS
T02994
Name
(RefSeq) WD-40 repeat-containing protein MSI4
KO
K10752
histone-binding protein RBBP4
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03082
ATP-dependent chromatin remodeling
tcc03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
18596136
03083 Polycomb repressive complex
18596136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tcc03036
]
18596136
Chromosome and associated proteins [BR:
tcc03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
18596136
Histone modification proteins
HAT complexes
HATB complex
18596136
HDAC complexes
Sin3A-HDAC complex
18596136
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
18596136
PRC2.2
18596136
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
18596136
Heterochromatin formation proteins
Other heterochromatin formation proteins
18596136
Chromatin remodeling factors
NuRD complex
18596136
NuRF complex
18596136
NuRF complex (fruit fly)
18596136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
CAF1C_H4-bd
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_RIG_2nd
WD40_Gbeta
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
WDR55
EIF3I
Beta-prop_Aladin
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_WDR41
WD40_RFWD3
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Phage_Adaptor_PhiTE
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
18596136
NCBI-ProteinID:
XP_017977981
UniProt:
A0AB32WJH8
LinkDB
All DBs
Position
6:complement(19244833..19252416)
Genome browser
AA seq
507 aa
AA seq
DB search
MQNPRKSAEAGKFIRHKENKGKKKNKEREERETRRRERVGKKMEAEKGRSVEERYTQWKS
LVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVV
KPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWD
LEAQPNRHAVLGATDSRPDLILTGHQDDAEFALAMCPTEPFVLSGGKDKSVVLWSIHDQI
STLAMEPGPTKSPGSTGTSTKHASKGGGNNDKPVDGPVIGPRGIYQGHEDTVEDVQFCPS
STQEFCSVGDDSCLILWDARAGVTPAVKVEKAHNADLHCVDWNPHDVNLILTGSADNTVH
MFDRRNLTSGGIGSPVHKFEGHSAAVLCVQWSPDKSSVFGSSAEDGILNIWDHEKIGKKQ
DTAGSRAANAPPGLFFQHAGHRDKVVDFHWNASDPWTIVSVSDDCESTNGGGTLQMWRMI
DLIYRPAEEVLAELDKFKSHILACEKN
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacccaagaaaatcggcggaggcgggaaaatttattagacataaagaaaacaaa
ggcaaaaagaaaaacaaagagagggaggagagagaaactagaagaagggaaagggtaggg
aaaaaaatggaggctgagaaagggagatcagtggaggagagatacactcaatggaagtct
ctggtgcctgtcctctacgattggctcgctaatcacaacctcgtttggccttctctctct
tgccggtggggcccgcaactagagcaagctacttacaagaatcgccagcgtctttacctt
tcagaacagactgatggaagtgttccaaacacacttgtaatagcgaactgtgaggttgtt
aaacctagggttgcagctgcagagcacatttctcagttcaatgaagaagcacgctctccc
tttgtgaagaaatataaaactattatacaccctggcgaggtgaatagaatcagagaactt
ccacagaacagcaagatagtggcaacacacactgatagtcctgatgtcctcatttgggat
ttagaggcccaaccaaatcgtcatgctgtgctgggagctacagattctcgcccagatctg
atattgactggacatcaggatgatgctgaatttgctcttgctatgtgcccaactgaaccc
tttgtgctatctggaggcaaggacaagtcagtggttttgtggagcattcatgatcagatc
tctactcttgccatggagccagggcccacaaagtctccaggatctactggcacaagtaca
aaacatgcctctaagggtggtgggaataatgataaacctgtggatggccctgtcattggg
ccacgaggtatctaccagggccatgaggatactgttgaagatgtacaattctgcccgtcg
agcactcaggaattctgcagtgtaggtgatgattcttgtcttatattatgggatgcaaga
gccggcgtcactccagctgtcaaggttgagaaagctcataatgctgatcttcattgtgtt
gattggaatcctcatgatgtaaatctcattttgacagggtctgctgataatactgttcac
atgtttgaccgtcgaaacctcacttcgggtggaattggatcacctgttcataaatttgag
ggtcacagtgctgctgtcctttgtgtacagtggtccccagacaagtcatcagtctttgga
agttctgctgaggatgggatattaaatatctgggatcatgagaagattgggaaaaagcaa
gatactgctggatccagggcagcaaatgctcctcctggcttattctttcagcatgctggg
catagagacaaggttgttgactttcactggaatgcatctgatccatggacaattgtcagt
gtgtcggatgattgtgaaagcactaatggtggtggtactctacagatgtggcggatgatt
gatttgatttatcgtcctgcggaggaggtcctagctgagctggacaagtttaaatctcac
atcctggcatgtgaaaaaaattag
DBGET
integrated database retrieval system
