Theobroma cacao (cacao): 18596188
Help
Entry
18596188 CDS
T02994
Name
(RefSeq) myosin-17
KO
K10357
myosin V
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
18596188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcc03019
]
18596188
04131 Membrane trafficking [BR:
tcc04131
]
18596188
03029 Mitochondrial biogenesis [BR:
tcc03029
]
18596188
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tcc04812
]
18596188
Messenger RNA biogenesis [BR:
tcc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
18596188
mRNA cycle factors
P-body specific factors
18596188
Membrane trafficking [BR:
tcc04131
]
Others
Actin-binding proteins
Myosins
18596188
Mitochondrial biogenesis [BR:
tcc03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
18596188
Cytoskeleton proteins [BR:
tcc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
18596188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
nSTAND3
TSC22
AAA_22
AAA_16
IQ_SCN5A_C
Flp1_like
Motif
Other DBs
NCBI-GeneID:
18596188
NCBI-ProteinID:
XP_007024563
UniProt:
A0AB32V021
LinkDB
All DBs
Position
6:19690670..19705303
Genome browser
AA seq
1524 aa
AA seq
DB search
MAGPDNIIIGSQGWVEDPNLAWIDGEVVRINGNEVHVKTTNGKTVVTNISKAFPKDTEAP
PGGVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQY
KGATFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAFLGGRS
GVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKTGRISGAAIRTYLLE
RSRVCQISNPERNYHCFYLLCAAPPEDIERYKLGSPKTFHYLNQSNCYELDGVNDAHEYL
ATRRAMDIVGINDQEQEAIFRVVAAILHLGNINFAKGKEIDSSVIKDEKSRFHLNMTAEL
LRCDAQSLEDALIKRVMVTPEEIITRTLDPENAVASRDALAKTVYSRLFDWLVDKINISI
GQDPNSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIN
WSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKNNKRFIKPKL
SRTDFTISHYAGEVTYQANQFLDKNKDYVVAEHQALLTASECSFVASLFPPLPEESSKSS
KFSSIGSRFKLQLQSLMETLSATEPHYIRCVKPNNVLKPAIFENFNIIQQLRCGGVLEAI
RISCAGYPTRRTFYDFLNRFGLLAPDVLEGNYDDKTACQMILDKKGLKGYQIGKTKIFLR
AGQMAELDARRAEVLGNAARTIQRQIRTYVARKEFISLHGAAINLQSYLRGNMARKIYEE
LRKEAGALKIQKNFRRHIDRKSYLTMRKSAITLQTGLRTMTARNEFRFRKQTKAAIIIQA
HWRCHQAYSYYQSLQKAVLVSQCGWRCRVARRELRKLKMAARETGALKAAKDKLEKRVEE
LTWRLQLEKRLRTDLEEAKAQEIAKLQDALHEKQLQVEEANSMVIKEREAARKAIEEAPP
VIKETPVIVQDTERINSLISEVEKLKALLLAEKQTAEEAKQAHAATQAKNGELTKKLEDA
EKRAEHLQDSVHRLEEKLSNLESENQVLRQQALTMSPTGKALTARPRTTIIQRSPENGNV
LNEEIKKALPKPQVPETEEKPQKSLNEKQQENQELLIKCISQDLGFSGGKPVAACLIYKC
LLHWRSFEVERTSIFDRIIQAIGISIEAPDNNDLLSYWLSNSSTLLLLLQRTLKASGAAS
LTPQRRRSTSASLFGRMSQGLRGSPQSAGFSFLNGRVLGGLDDLRQVEAKYPALLFKQQL
TAFLEKIYGMIRDNLKKEIAPVLASCIQAPRTSRASLVKGRSQANAVAQQALIAHWQSIV
KSLNNYLKTMRANYVPSFLVCKVFTQTFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAE
LEHWCHDATEEFAGSAWDELKHIRQAVGFLVIHQKPKKTLKEITNDLCPVLSIQQLYRIS
TMYWDDKYGTHSVSSDVIASMRVMMTEDSNNAVSSSFLLDDDSSIPFSVDDISKSMQQIE
VAEIDPPPLIRGNSGFTFLLQHSE
NT seq
4575 nt
NT seq
+upstream
nt +downstream
nt
atggctggcccagataacataattataggttcgcaagggtgggttgaggatcctaatcta
gcatggattgatggggaagttgttcggatcaatggcaatgaggttcatgttaaaaccaca
aatggaaaaactgttgtcacaaatatatcaaaagcatttccaaaagatactgaagctccg
cctgggggtgtagatgacatgacaaagctttcatatctgcacgaacctggagttctgcaa
aacttggctacaagatatgaacttaacgaaatctatacatacaccggcaatatcctgatc
gcagttaatccatttcaaagattgcctcatctttatgacactcacatgatggaacaatat
aaaggagctacatttggagaactaagtccacatgtttttgcagttggtgatgccgcgtac
agggcaatgattaatgaaggaaaaagcaattctattctggttagcggagaaagtggtgct
ggtaaaactgagaccacaaagatgctgatgaggtatcttgcattcttgggtgggcgatct
ggagtagaaggacgcacagttgagcagcaagttctggagtccaatccagttcttgaagca
tttggcaatgctaaaacggttaggaacaacaattcaagtcgttttggtaaatttgttgaa
atccaatttgacaagactggaaggatatctggggcagctatcagaacctatttacttgaa
agatctcgtgtttgccaaatttctaatcctgagaggaactaccactgcttttacctcctt
tgtgctgcaccacctgaggatattgaaagatataagttgggcagtccgaaaactttccat
tatttaaatcaatctaattgctatgagttagatggtgtaaatgatgctcatgagtatctc
gcaaccagaagggctatggatattgttggaatcaatgaccaagagcaggaggcaattttt
agagtagtagctgcaattcttcaccttgggaatattaattttgccaagggaaaggaaata
gattcctcggtcatcaaggatgagaagtctagatttcacctcaatatgactgctgaactt
cttaggtgtgatgcccagagcttggaagatgccctcatcaaacgtgtcatggttacacca
gaagaaattatcacaagaactcttgaccctgagaatgcagttgccagcagggatgctttg
gccaaaacagtatattctcgcttatttgactggcttgtggataaaattaacatttcaatt
ggacaggatccaaactcgaagtcaataattggagttcttgatatttatggttttgaaagt
tttaagtgtaacagctttgagcagttttgtatcaacttcacaaatgaaaagctgcagcaa
catttcaatcagcatgtattcaaaatggagcaggaggaatatacgaaagaagaaataaat
tggagctacattgagtttgtcgataaccaagatgtcttggatctaattgaaaagaagcct
ggaggaataattgcgcttttagatgaagcctgcatgttccccaagtctacccatgaaact
tttgctcagaagctgtaccagactttcaaaaataataaacgtttcattaaaccgaagctt
tcccgtactgattttactatctcacactatgcaggggaggtaacttatcaagcaaatcag
tttctggacaaaaataaagattatgttgtggctgaacatcaagctctgttgactgcatca
gagtgctcctttgtggcaagtctttttcctccacttccagaagaatcgtctaagtcatcc
aagttttcttccattggatcacgcttcaagctacaacttcagtccctgatggagaccttg
agtgctacagaacctcactacattagatgtgttaagccgaataatgtcctcaaacctgcc
atttttgagaatttcaacatcattcaacaattacgctgtggtggtgttcttgaagcaatt
aggataagctgtgctggatatcctaccagacgtacgttttatgattttcttaaccgtttt
ggtctacttgctccggatgttttggaaggaaattatgatgataagactgcatgtcaaatg
atacttgataagaagggactgaaaggataccagataggcaagacaaagattttcctgaga
gcgggtcagatggcagagttggatgctaggagagcagaggtgcttggaaatgcagccagg
accatccaacggcagattcgtacatatgttgctcgcaaggaattcatctcattgcatggg
gcagctatcaatcttcagtcttatctgagaggtaatatggcccgtaagatatacgaagag
ctgaggaaggaagctggagctttgaaaattcagaagaatttccgtcgacacattgacagg
aaatcctatttgactatgaggaaatctgcaattacattgcagacaggattaagaacaatg
actgcacgcaatgaatttaggttcaggaagcaaactaaagctgccataatcatacaggct
cactggcgttgccaccaagcttattcctattatcagagtcttcagaaggctgtattagtt
tcacagtgtggctggaggtgcagagttgctagaagagagctcagaaagctcaaaatggct
gcaagagaaacaggagctctgaaagcagcaaaggacaagctagagaaacgagtggaggaa
cttacatggcgtttgcaacttgaaaagcgattaaggactgatcttgaggaggcaaaagct
caagaaattgcaaaattgcaagatgcattgcatgaaaagcaattacaagtggaagaagct
aactctatggttatcaaggaaagagaggcagcacgaaaagccattgaagaagcacctcca
gtcattaaagaaacccctgttattgttcaagatacagaaagaataaattccttaatatct
gaagttgagaagttgaaggctttgctattggctgaaaagcaaacagctgaagaggcaaag
caagctcatgccgctactcaggccaaaaacggggaactgactaagaagcttgaagatgca
gagaagagagcagaacaccttcaagattctgtgcatagactagaagagaagctatctaat
ttggaatcagagaatcaggtactacgtcaacaagcactcaccatgtcgccaacaggcaaa
gctttaactgcaagacccaggacaacaatcattcagaggtctcctgagaatggaaatgtt
ctgaatgaagaaataaagaaagcactaccaaaaccacaggtaccagagactgaggagaaa
ccccaaaaatctcttaatgagaagcagcaggagaaccaggagctgctaataaagtgtatt
tcacaggatttaggattctctgggggcaagccagttgctgcttgtctgatatacaaatgc
cttctccattggaggtcatttgaagttgaaagaacaagtatttttgatagaataattcaa
gccataggcatatccatagaggcaccggataacaatgacttgttatcctattggttatca
aattcgtccactttactgttgctgcttcaacgtacactaaaagctagtggagcagcaagc
ttaactccacaacggcgaagatcaacgtcagcttctctgtttgggaggatgtctcaaggg
cttcgaggttctccacaaagtgctggtttctcgtttcttaatggtcgggtgcttggtggt
cttgatgacctacgacaagttgaagcaaaatatccagctttgcttttcaagcagcaactg
acagccttccttgagaagatatatggaatgataagggacaatttgaaaaaagagatagct
ccggtgcttgcatcatgtattcaggcacctagaacttccagggcgagcctagtgaaggga
cgttctcaagctaatgctgtagctcaacaagctcttattgctcactggcaaagcattgtg
aaaagtttaaataattacttgaagacaatgagggccaattatgttccttcttttttagtt
tgcaaagtgtttactcagacattttctttcattaatgttcaattgtttaacagccttctt
ttgcgacgtgaatgttgctcatttagcaatggggagtatgttaaagctgggctagctgag
ctggaacattggtgccatgatgcgactgaggagtttgcaggctcagcctgggacgagttg
aagcatattagacaagcagttggcttcctggtcatacaccagaagcccaaaaagaccttg
aaagaaataaccaatgatctttgcccagtgcttagcatacagcagttgtacaggataagc
acaatgtattgggatgacaaatatggcacacatagtgtatcatcagatgtaattgcgagt
atgagagttatgatgactgaggactccaataatgctgttagcagttcgtttctattggat
gacgattcaagcattccattctctgtggatgacatctccaagtcaatgcaacaaatagag
gtggctgaaattgatcctccacctctgattcgcggaaactctggtttcacattcttgtta
cagcattcagaatga
DBGET
integrated database retrieval system
