Theobroma cacao (cacao): 18596210
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Entry
18596210 CDS
T02994
Name
(RefSeq) transcription initiation factor TFIID subunit 12b
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
18596210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcc03021
]
18596210
03036 Chromosome and associated proteins [BR:
tcc03036
]
18596210
Transcription machinery [BR:
tcc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
18596210
Coactivators
SAGA/TFTC/STAGA complex
18596210
Chromosome and associated proteins [BR:
tcc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
18596210
STAGA complex
18596210
TFTC complex
18596210
SAGA complex
18596210
SLIK complex
18596210
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Histone
Motif
Other DBs
NCBI-GeneID:
18596210
NCBI-ProteinID:
XP_007024609
LinkDB
All DBs
Position
6:19885611..19893092
Genome browser
AA seq
670 aa
AA seq
DB search
MAETASSSASPNPMMMDPSSSTATPPSSSATTNINPTPTPPPPTASATTTLTQTPSTTSS
ILPQSNNPSPQIPPPSPSIDPSLQNPQQNLQQQQHQHQHQQQISQISSPPLPPLSQQQQQ
QQQQLLQQQQTQQNVAALSNFQIQQTLQRSPSFSRLNPLQQQQQQQSHQQQQQQQQSQYG
TVLRQQAGLYGQMNFGGSASIQANQQQNQQIQQISNPNLPRSALIGQSGHLPMLSGAAAA
AAAQLSLQPQLLASPRQKAGLVQGSQFHPGNPTGQSLQGMQAMGMMNLSSQLRANGNLYA
QHRINQGQMRQQLSQQTQLTSPQVQSLPRTSSQAFINPQLSGLAQSGQPGMMQNSLLQQQ
WLKQMPSISGPGSPSFRLQRQSQVLLPQQLASSSPQLHQNSMALNSQQLSQLVQQQSQMG
HSQMQQPQQHQQQQQQQQQQQQQQHQLQQQPLQQLQPQQPPLHQPQQQQSPRMPGPAGQK
SLSLTGSQPDATASGTTTPGGSSSQGTEATNQLLGKRKIQDLVSQVDSQGKLEPEVEDLL
LEIADDFIDSVTTFACSLAKHRKSSTLESKDLLLHLEKNWHLTIPGFSSEERNQTRPLSS
DLHKQRLDMIRALMESSQPETTANNPKEMIRQGLGNPVGANHLMRPSPSSEQLVSQAAGS
QMLQQITRLW
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaactgcatcttcatctgcctctccgaatcccatgatgatggacccatcatca
tcaacagcgacaccgccatcgtcatcggcgacgacaaatattaacccaacaccaacacca
ccacctccgacagcatcggcgacgactacgttaacacaaactccctcaactacttcctca
attctacctcaaagtaacaacccttctcctcaaatccctcctccttcaccttccattgac
ccttcactgcaaaacccgcagcaaaatttacaacagcaacagcaccagcaccagcaccaa
cagcaaatctcgcaaatttcgtctccacctctccctcctctttcccaacaacaacagcaa
caacaacaacaacttttacaacagcagcaaacgcaacaaaatgttgcagctttatccaat
ttccaaatccaacaaacccttcagagatccccatctttttcacgccttaacccactccaa
caacaacagcagcagcaaagccaccagcagcagcaacaacagcaacagtctcagtacggc
accgttttaagacaacaagcagggttatatgggcaaatgaattttggtgggtcagcttca
attcaagctaaccagcaacagaaccagcagattcaacagataagcaatcccaatttacca
aggtcagctttgattgggcaaagtggtcatttgcctatgctcagtggtgcagctgcagct
gctgctgctcagttgagtttgcagcctcagcttttagcttcgccgaggcagaaggctggc
ttggtgcaagggtctcagtttcatccaggaaaccccactgggcaatctttgcaagggatg
caggcaatggggatgatgaatttgagctcacaactgagggctaatggaaatctttatgct
caacatcggataaatcagggacagatgaggcagcaattatcacaacaaactcaactcaca
tctcctcaggttcaaagcttaccaagaacatcttcccaggcatttataaaccctcagtta
tctgggctggctcagagtggacaaccgggtatgatgcagaactctctcttgcagcaacag
tggttgaagcaaatgccatcaatatctggtccaggctcaccttcattccgccttcagcgg
cagtcacaggtcctcttgccgcagcaactggcttcgtcttctcctcagttgcaccaaaat
tctatggccttgaactctcaacaattgtctcagttggtacaacagcagtcacagatggga
cattctcaaatgcagcaaccacagcaacatcagcagcagcaacaacaacaacaacaacag
caacagcagcagcatcagctacaacaacaacctctgcaacaattacaaccacaacagcca
ccgttgcatcagcctcaacagcagcagtctccaaggatgcccggacctgcaggccagaaa
tctctgagtttgacaggatcacagcctgatgcaactgcatctggtacaaccacacctggg
ggaagttcgagccaaggaactgaggcaaccaatcaacttcttggaaagagaaagatacag
gatctggtttcacaggttgattcgcaaggcaagctggaaccagaagttgaagatctactt
ctggagattgctgatgacttcatagactctgtgactacatttgcatgcagtttggcaaag
catcggaaatcatcaacattagagtccaaagatctcttgctacacttagagaaaaactgg
catttgactattccaggattttcaagtgaagagcggaaccaaacaagacctttatcaagt
gacctccacaagcagcgtcttgatatgatccgggcactgatggaatcatcacagcctgaa
acaactgcaaataatcctaaagaaatgatacgacaagggcttggcaacccagttggtgca
aaccatttaatgagaccttcaccaagttctgagcagttggtatcacaagcagctggttca
caaatgctccagcaaataactcggttatggtaa
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integrated database retrieval system
