Theobroma cacao (cacao): 18596262
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Entry
18596262 CDS
T02994
Name
(RefSeq) nuclear pore complex protein NUP107
KO
K14301
nuclear pore complex protein Nup107
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
18596262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcc03019
]
18596262
03036 Chromosome and associated proteins [BR:
tcc03036
]
18596262
Messenger RNA biogenesis [BR:
tcc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
18596262
Chromosome and associated proteins [BR:
tcc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
18596262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
18596262
NCBI-ProteinID:
XP_007024695
UniProt:
A0AB32UZK8
LinkDB
All DBs
Position
6:20320602..20334988
Genome browser
AA seq
1088 aa
AA seq
DB search
MDVEMETSPSYFDPQDDFAREKFRRYGCRKRNSSSSISPRQESGVSKFSEAKLLYEGPII
HSPTNAALLLENIKQEAESFDTDYFEGTPAMTRSASKRRPLHDGHRIAETDDGVDSIRRL
GSHALKACKIEEDLSADNGDTTFALFASLLDSALQGLIPIPDLILQFERSCRNVSESIRY
GSNIRHRVVEDKLMRQKAQLLLDEAATWSLLWYLYGKVTDEPPEELLLSPSTSHIEAGRF
VVNDHTAQLCLRIVQWLEGLASKALDLESKVRGSHVGTYLPNSGIWHHTQRFLKKGASAA
NTVHHLDFDAPTREHANQLPDDKKQDESLLEDVWTLLRAGRLEEACDLCRSAGQPWRSAT
ICPFGGLDLFPSIEALLKNGKNRTLQAIELEGGIGHQWRLWKWASYCASERISEQNGGKY
EIAVYAAQCSNLKHMLPICADWETACWAMAKSWLEIQVDLELARSQSGRMEQLKSYGDSI
DGSPEGIDSTSQPGSGPENWPLQVLNQQPRDLSALLRKLHSGEMVHEAVTRGCKEQQRQI
EMNLMLGNIPHLLELIWSWIAPSEDDQSISRPRDPQMIRFGAHLVLVLRYLLADEMKDPF
KEKLMTVGDRILHMYSMFLFSKHHEELVGIYASQLAHHRCIDLFVHMMELRLNSSVHVKY
KIFLSAMEYLPFSQGDDLKGSFEEIIERILSRSRETKVGKYDESSDVAEQHRLQSLQKAL
VVQWLCFTPPSTIANVKDVSAKLLLQALIHSNILFREFALISMWRVPAMPIGAQELLSLL
AEPLKQLSETPDTFQDYVSENLKEFQDWSEYYSCDATYRNWLKIELANADVSPVELSVEE
KQRAIEAAKETLNLSLLLLLRKENPWLISVEEHVNDSTEFLELHATAMLCLPSGESMCPD
ATVCAALMSALYSSVTEEVVVERQLMVNVAISSRDSYSIEVVLHCLAVEGDGIGSHILND
GGLLGAVMAAGFKGELLRFQAGVTMEISRLDAWFSSKDGSLEGPATYIVQGLCRRCCIPE
VILRCMQVSVSLMESGNPPESHDRLIELVSSLETGFIHLFSQQQLQEFLLFEREYSICKM
ELQEELSS
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggaaatggagacgtctcctagctactttgaccctcaagatgacttcgccagg
gaaaagtttcgacgttatggctgcaggaaaagaaactcaagttcaagcatatctccacgg
caagaaagtggggtctcaaagttcagtgaagctaagttgttgtatgagggaccgattatc
cacagcccaactaacgctgcacttcttcttgaaaacatcaaacaagaggctgagagcttt
gatactgattattttgaaggaacacctgcaatgacacgatcagcttctaagaggagacca
ttacacgatggtcatcgaattgcagagactgatgatggtgttgattcaatccgcagatta
ggaagtcatgcattaaaagcttgcaagattgaggaggatttatcggctgataatggagac
acgacctttgctttgtttgcatctctacttgattctgctcttcaagggctaatcccgatt
ccggatctgattttacaatttgagagatcatgccggaatgtttcggagtcaattcgatat
ggatccaacatacgccatcgggtagtagaggacaaattgatgagacagaaggctcagctc
ctgcttgatgaggctgctacgtggtctctcctgtggtacctttatggcaaagtgaccgat
gaaccccctgaagagctccttctgtctccttcaacatcgcatatagaggctggccggttt
gttgtgaatgatcacacagcacaattgtgcctccgtattgttcaatggctagaaggattg
gcctctaaagcccttgatctggaaagcaaggttcgaggatctcatgttggtacctatctt
cccaactctggaatttggcaccacactcagaggtttcttaaaaagggtgcctctgctgct
aacactgttcaccacttggattttgatgctccaacacgggaacatgctaatcagctgcct
gacgataaaaaacaagatgagtctttacttgaggatgtctggactctgttaagggctgga
agactggaagaggcatgtgatctctgccgttctgctggacagccatggagatctgcaact
atatgcccatttggagggttggacctatttccttctattgaagcactactgaagaatgga
aaaaatagaactctgcaagctattgaacttgagggcggcattggtcatcaatggcgcctt
tggaaatgggcttcctattgtgcttcagagagaatttctgaacaaaatggtgggaaatat
gaaatagcggtttatgcagcccaatgtagcaacttgaagcacatgcttccgatctgtgca
gactgggagacagcctgttgggcaatggccaaatcgtggcttgaaattcaggtagatcta
gaattagctcgttcacaatctggcaggatggaacaattaaaaagctatggagatagtatt
gatggaagtcctgaaggaattgatagtacctctcagcctggatctggacctgaaaattgg
ccactgcaagttttaaaccagcaaccaagagacctttctgcccttcttcggaagcttcat
tcaggtgaaatggtgcatgaagctgttactcgaggatgcaaggagcagcaacgacaaatt
gagatgaatctgatgttagggaatataccacatctccttgagcttatatggtcatggata
gccccttcagaagacgatcaaagcatctccaggcctcgtgatcctcagatgattcggttc
ggtgcacacctagtgcttgttcttagatatttacttgctgatgaaatgaaggatcctttc
aaagaaaagctaatgactgttggtgatcgtattctacacatgtactctatgtttctattc
tctaagcatcatgaagaattggttgggatttatgcttctcagcttgcacatcatcgctgt
atcgacctctttgtgcacatgatggagctaaggctgaatagcagtgtgcatgtcaaatat
aaaatcttcctttctgcaatggagtatttgccattttctcaaggggatgatttgaaagga
agctttgaagaaattattgagaggattttgtcacgatcacgtgaaaccaaagttggaaaa
tatgatgaatcatctgatgttgcagagcaacataggctgcagagtcttcaaaaagctttg
gttgtccaatggctctgctttacacctccctccacgattgctaatgttaaagatgttagt
gccaaacttcttttgcaagcattaatacacagcaatatattgttcagggagtttgctctg
atttctatgtggagagtgccggccatgcccataggtgcacaagaattacttagtcttctt
gctgagcctttgaagcagctttcggaaactcctgatacttttcaggattatgtttctgag
aatctgaaagagtttcaagactggagtgaatactactcctgtgatgcaacatatcgcaac
tggctcaaaattgaattagccaatgcagatgtttctcccgttgaactttcagtagaggaa
aaacaaagagcaatcgaagcagccaaagagacattgaatttatctttgttattgctactg
aggaaagaaaacccttggttgatttctgtggaggagcatgttaatgactcgacagaattt
cttgaactgcatgctactgcaatgctctgcctgccttctggtgaatcaatgtgtccagat
gctactgtttgtgctgcattgatgagtgcactttattcttcggtgactgaggaagttgtc
gtcgaacgtcagttaatggtgaatgttgccatttcttcaagggacagctacagtattgag
gttgttctgcactgcttggcggtagagggtgacggaattggttcacacatcctcaatgac
ggcggccttctgggtgctgttatggcagctggcttcaaaggtgagcttcttagattccaa
gcaggagttacaatggagatatctcgattagatgcttggttttcaagcaaagacggttct
ttggaggggccagcaacatatattgtgcagggcctctgtcgtaggtgttgtattccagaa
gtcattcttcgatgcatgcaggtttctgtttcactcatggagtcaggtaaccctcctgaa
agccatgaccggttgattgaactagtctcaagtttggagactgggttcatccatctgttc
agtcagcaacaattgcaggaatttttactatttgagagggaatattccatatgcaaaatg
gagcttcaggaggagctctcctcttga
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