KEGG   Theobroma cacao (cacao): 18596343
Entry
18596343          CDS       T02994                                 
Name
(RefSeq) ubiquitin receptor RAD23b
  KO
K10839  UV excision repair protein RAD23
Organism
tcc  Theobroma cacao (cacao)
Pathway
tcc03420  Nucleotide excision repair
tcc04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:tcc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    18596343
  09124 Replication and repair
   03420 Nucleotide excision repair
    18596343
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:tcc03051]
    18596343
   03400 DNA repair and recombination proteins [BR:tcc03400]
    18596343
Proteasome [BR:tcc03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    18596343
DNA repair and recombination proteins [BR:tcc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      18596343
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin UBA_7 Rad60-SLD CUE TECR_N UBA_3 Rad60-SLD_2 Dsc3_N UBA_RAD5A Ubiquitin_4 MmeI_C
Other DBs
NCBI-GeneID: 18596343
NCBI-ProteinID: XP_017978620
UniProt: A0AB32WI53 A0A061GC26
LinkDB
Position
6:20859270..20863020
AA seq 373 aa
MKLTVKTLKGSHFEIRVQPNDTVMAVKKNIEDAQGKDNYPCGQQLLIHNGKVLKDETTLA
DNKVSEDGFLVVMLSKSKSLGSAGTSSAQPASSTPSVTPPASNPAPAPEAPAQAPTSKGT
TSASDTATANPNTDTYSQAASNLVAGNNLEQTIQQLMDMGGGNWDKETVTRALRAAYNNP
ERAVDYLYSGIPESAEVAVPVGRFPTSQTTETGAAPAAPVSGAPNSSPLNMFPQETLSGA
GAGGLGSLDFLRNNQQFQALRSMVQSNPQILQPMLQELGKQNPQLLRLIQEHHAEFLQLI
NEPLEGSEGDIFDQAEQDMPHAINVTPAEQEAIERLEAMGFDRALVIEAFLACDRNEELA
ANYLLENAGDFED
NT seq 1122 nt   +upstreamnt  +downstreamnt
atgaagctcaccgtcaaaaccctcaaaggcagtcactttgaaattagggttcagcctaat
gacaccgttatggctgtgaagaaaaacatagaagatgcacaaggaaaggacaattaccca
tgtgggcagcagcttttgattcataatgggaaggttttgaaagatgaaactaccttagct
gataacaaagtctccgaggatggttttcttgttgtcatgctcagcaagagcaaatcgttg
ggttcagctggcacctcatctgctcagcctgcttcatcaactccatccgtaactccacct
gcttctaatcctgcccctgctcctgaagctcctgcacaagcacccacctcaaagggcacc
acatctgcttcagatactgcaacagctaatccaaatactgatacctatagtcaagctgct
tcgaatttagttgctggaaataatctagaacagactattcagcaattgatggatatgggc
ggtggcaattgggataaagaaacagtaactcgcgcacttcgagctgcttataataaccca
gagcgagcagtggattatctatattccgggattcctgaatcagcagaagtggctgtgcca
gtgggtcgttttcctacaagtcagactactgaaactggtgcagcccctgctgctcctgtt
tcaggggctcctaattcgtcgcctttgaatatgtttcctcaggaaacactttctggtgct
ggtgctggtggccttggatccctggatttcctcagaaacaaccaacagttccaagcattg
cgttcgatggtgcaatcaaacccacaaattctacagcccatgctacaggagcttggaaag
caaaacccccagcttttaagactaattcaagagcatcatgcagagtttcttcagctaata
aatgaacctcttgaaggttctgaaggggatatatttgatcaggctgaacaagacatgcct
catgctatcaatgtcaccccagcggaacaggaagctattgaacgacttgaagcgatggga
tttgatagagcactcgtcattgaagcctttttggcttgtgatcgcaacgaggaattggca
gcaaattatttactggaaaatgctggagattttgaggattga

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