Theobroma cacao (cacao): 18596475
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Entry
18596475 CDS
T02994
Name
(RefSeq) KH domain-containing protein At4g18375
KO
K21444
poly(rC)-binding protein 3/4
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcc03019
]
18596475
Messenger RNA biogenesis [BR:
tcc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
18596475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
MOEP19
Motif
Other DBs
NCBI-GeneID:
18596475
NCBI-ProteinID:
XP_007025038
UniProt:
A0AB32V132
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Position
6:complement(21794270..21801694)
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AA seq
628 aa
AA seq
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MGESAKRHRGQRDNDGDSRNQKRRLNDKNEKNNDELVVYRILCPDVVIGSVIGKSGKVIN
SIRQETRAKVKVVDPYPGAKDRVITIYCYVKDKEEVEVDDEFNDKEPLCAAQDALLRVHA
AIANAVALIGDSDQKRTDRYGEECQILVPSSQSANIIGKAGTTIKKLRGKTRTIIKVTAK
DAGDPNHSCAMDFDNFIQITGEPEAVKKALFAVSAIMYKFSPREEIPLETTVAEAPPAPS
IIIPSDVPIYPPGGLYPNPDPTVPSRSVPPILGATHVPDLQGYADTGCTWPVYSSALPVV
SGFGGASRSEELKIRVLCPFDKIGRVIGRGGGTIKSIRQASGARIEVDDTKADRDECIIT
VTATESPDDLKSMAVEAVLLLQGKINDDDDNSVTMRLLVPSKVIGCVIGKGGSIINEIRK
RTKADVRISKGNKPKCADANDELVELAGKVNNVRDALIQIVLRLRDDVLKEKDSGPNPSV
GADSFYSSSASLAVPSLLPSVPPVPPLAFDQRAESGSGLGVLPTSSLYGYGTLPMGESGY
GSMSSYSSKLYGGLHPSSTLEILIPANAVGKVMGKGGLNLTNIRKISGAMIEISESKSSR
GERVALITGTLQQKREAENLIQAFIMAT
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagagtgctaagcgtcatcgaggacaaagagataatgatggggatagtaggaat
cagaagagaagattgaatgataaaaatgaaaaaaacaatgatgaactggttgtttataga
atactttgccctgatgtagtgattggaagtgtcattggtaaaagtggtaaagtcataaat
tcgattaggcaggagacgagggcaaaggttaaggtggttgatccatatcctggtgccaag
gatagggttataacaatctattgttatgttaaggataaggaagaagttgaggtagatgat
gaattcaatgacaaagaaccgttatgtgctgctcaggatgctcttcttagagttcacgct
gcaattgcaaatgctgtggctctcataggggattctgatcagaaacggacagataggtat
ggggaggaatgtcaaattctcgtcccatctagccaatctgctaatatcattggtaaggct
ggcacaactattaagaaactgaggggcaagaccaggaccatcattaaggttactgctaag
gatgctggtgatcccaatcattcatgtgccatggattttgacaacttcattcagataact
ggtgaaccagaggctgtaaagaaagcactttttgctgtttctgcaatcatgtacaagttc
agtccaagagaagaaattcctcttgagacgactgtggcagaagctcctccagctccaagc
attataatcccatcagatgtccctatttatccaccaggtggcttatatcctaatccagat
cctactgtaccttctagatcagttccaccaatattgggtgccacccatgtgccagatctt
cagggatatgctgatacagggtgtacctggcctgtgtattcatctgctcttcctgtggtt
tctggttttggtggtgcatctcgatctgaagagttaaaaatcagagtactatgcccattt
gacaagattgggcgtgtcattggcaggggagggggtactattaagagtataaggcaggca
agtggtgctcgtatcgaggttgatgatacaaaggctgatcgtgatgagtgtattatcact
gtcacagctacagagtcacctgatgatttaaaatccatggctgttgaagctgttctgttg
ctgcaagggaagattaatgatgacgatgataattctgtgactatgaggctccttgttcca
tctaaggttattggttgtgttattggaaaaggtggttctattataaatgaaattcggaag
agaactaaagctgatgttcgtatatcaaaagggaataagccaaagtgtgctgatgccaat
gatgagctcgttgagcttgctggaaaagttaataatgtgagagatgcgcttatacagatt
gttttaaggctccgagatgatgttttgaaagaaaaggacagtggtcctaacccttctgta
ggtgcagattctttctactcaagcagtgccagtcttgcagtgccatctctcttgccttct
gttcctccagttcctcctttggcttttgatcaaagagctgaaagtggaagtggccttggt
gtgcttcctacaagcagcctttatggatatggaaccttgccgatgggcgaaagtggctat
gggtctatgtcctcatattcatcgaagctctatggagggttgcatccatcttcaactctt
gaaatattgatccctgctaatgcggtcggtaaagtgatgggcaaaggagggctcaattta
accaacataaggaagatatcaggggcaatgattgaaatttctgaatccaaatcctcacga
ggggaacgtgttgctcttataacaggcactctgcagcagaagcgtgaagctgaaaacttg
attcaggcatttataatggccacctga
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