Theobroma cacao (cacao): 18596514
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Entry
18596514 CDS
T02994
Name
(RefSeq) la-related protein 6A
KO
K15191
La-related protein 7
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcc03021
]
18596514
Transcription machinery [BR:
tcc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
7SK RNP complex
18596514
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Ortholog
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GFIT
Motif
Pfam:
La
RRM_1
Hen1_LCD
Motif
Other DBs
NCBI-GeneID:
18596514
NCBI-ProteinID:
XP_017979428
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All DBs
Position
6:22077204..22082244
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AA seq
383 aa
AA seq
DB search
MDSHVGPTTATATATAGPTPNSPPRDLLDFIPVGSPEEEITSPPSEEDHDRDHYHYHEHG
QDQDQNQSHDNSSATGVLTEDLKNKIIKQVEYYFSDVNLPTDKYMMSLIKKNKDGFVPIS
VIASFRKMKKLTRNYPSIITALKESSLLVVSSDEKKVKRKNPLPFIEVRDPKLFTVLVEN
LPEDHSVENIRRIFGEVGHIKNISIYDPHAVEESKKKGRADILISSKIHALVEYETVEAA
EKAVATLNDEQDWRNGMRVKLLKRVSKYGQRRQAWRGSDPEKNSTGRASDQTGDEENNTS
SEHHEDIPDEEDGEHLSKDKNGHRFRNRGRARRQKHRGTNGLGHGSTSAHAIEPSKPPPG
PRMPDGTRGFTMGRGRPLDSKQS
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggacagccacgtggggcccaccaccgccaccgccaccgccaccgctggccccaccccg
aactctccgccgcgtgatcttcttgatttcattcccgtcggatccccagaggaggagatt
acatcgccgccgtccgaagaggatcacgaccgcgaccattaccattaccacgagcacggt
caagatcaggatcagaatcagagtcacgacaactcgtcggcgactggtgtccttactgag
gatcttaaaaacaagatcattaagcaggtggaatactactttagcgatgtaaatttgccg
acggataagtatatgatgagtttgattaagaaaaacaaagacggttttgttcctatttca
gttattgcttcttttaggaaaatgaaaaaactcaccagaaattatccatcaataattact
gcactcaaagagtcttccctacttgttgtgagttctgatgagaagaaggtgaagcgcaaa
aatcctctgccattcattgaggtcagggatccaaagttattcactgttttggtagaaaat
cttccagaggatcattcagtggaaaacattaggaggatatttggtgaagttggacacata
aagaacatatccatttatgatcctcatgctgtggaagaatcaaagaaaaagggtagggca
gatattttgatcagtagtaagatacatgctctggtggagtatgagactgtcgaggctgct
gaaaaagctgtggctactttgaatgatgaacaggactggagaaatggcatgcgggttaag
cttcttaagcgagtgagcaagtatggacagcgaagacaagcttggaggggatctgatcct
gaaaagaacagcactggtcgagcatctgatcaaacaggagatgaagagaataatacatca
agcgagcatcatgaagatatacctgatgaggaggatggggagcatttatccaaggataag
aatggacatcgatttagaaatagaggacgtgcaaggagacagaaacatcgtggtaccaat
ggactaggccatggatctacatctgctcatgccattgaaccatcaaagccaccccctggc
ccaagaatgcctgatggaaccaggggattcacaatgggacgtggacgacctcttgattct
aagcagagctaa
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