Theobroma cacao (cacao): 18596811
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Entry
18596811 CDS
T02994
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
18596811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tcc04121
]
18596811
03036 Chromosome and associated proteins [BR:
tcc03036
]
18596811
Enzymes [BR:
tcc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
18596811
Ubiquitin system [BR:
tcc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
18596811
Chromosome and associated proteins [BR:
tcc03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
18596811
Noncanonical PRC1 (PRC1.1)
18596811
Noncanonical PRC1 (PRC1.3/1.5)
18596811
Noncanonical PRC1 (PRC1.6)
18596811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
zf-UDP
DUF4778
zf-rbx1
zf-RING_4
DUF7044
zf-Nse
Diphtheria_C
TRAF3_RING
ZNF512_C2HC
zf-C3HC4_5
zf-RING_11
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
18596811
NCBI-ProteinID:
XP_007025571
UniProt:
A0AB32V1Q2
LinkDB
All DBs
Position
6:complement(23618540..23624257)
Genome browser
AA seq
442 aa
AA seq
DB search
MPAQKRSSEAAITATSPEDDDPLLLDDRNNHEQHQQETEDAADGFTESDRSPSPCNEEEQ
EYILVKSADIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRMGNNECPACRTHCA
SRRSLRDDPNYDALIAALYPDIDKYEEEELAFHEEEKARNKQIQASIAQTLRRQSEVVGK
KRTVRATASAIVRRSQSRHHGGRKHRTSEPQESDDNENANGDGSRDSTSADEHHTEVKPK
RSKRWGGRFSHPSSAASADGVGDETDSEVNRESLGVSAPLVWPSERLHWGAGGMRSHTRH
GSLNGGNGKNVRNSRLSKLVDCLRNLKEKDDELDIHLMLVSVDEQRIPSLQQPYLCCRPT
LLVRQLCQYVALQTALQAREIEIYLVKGSYSMANMSTFVMTKPGLVDSVRDSLQVLKEEE
TLAGLGRQRSSHGHLLLAYQKK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgccagcacagaagcgttcttccgaagccgccatcaccgccacctcaccagaagacgac
gatcctctgcttctcgacgacaggaacaaccatgaacaacaccagcaagaaaccgaagat
gctgctgatggttttacagaatctgatcgcagcccttctccttgtaacgaagaagaacaa
gagtatattctagtaaaatcggctgacatacgcaaagaagtacaatgcccaatctgccta
gggatcattcgcaaaacaagaactgtaatggaatgcttacatcgcttctgtagagaatgt
attgacaaatctatgagaatggggaacaatgagtgccctgcttgccgcacacattgtgct
agtcgccggtctctaagagatgatcctaactacgatgccctaattgcagccttatatccg
gatattgacaaatatgaggaagaggaattggctttccatgaggaggagaaagctcggaat
aagcagatccaagcttccattgcccagactttgcgccggcaatcagaagttgttggtaag
aaacgaacggttagagccactgcatctgcaattgtaaggagatcacaaagtcgccatcac
ggggggagaaaacatcgaacttctgaacctcaagagtctgatgacaatgaaaatgctaat
ggagatggaagcagagattcaacttctgccgatgagcatcatactgaggtcaaaccaaag
agatcaaagagatggggtggtcggttttctcatccatcttcagctgctagtgcagatggg
gttggtgacgaaactgactcggaagtgaatagagaatccttgggtgtatctgcaccactt
gtctggccctcagaaaggcttcactggggagcaggcggcatgcgcagtcacacacgacat
ggcagtttgaatggtggaaatggaaagaatgtccgaaacagccgcctctctaagttggtg
gattgtctccggaacctaaaggagaaggatgatgagctcgatatccacctgatgcttgtt
tcagttgatgaacaaagaattcccagtttacagcagccttacctttgctgcaggcctact
ttgttggttaggcaattgtgccagtatgtagctctgcaaactgctttgcaagccagggaa
attgaaatctacctggtaaaagggtcctactctatggccaacatgtcaacctttgttatg
accaagcccggattagttgattcagtcagagatagcttgcaagttttaaaagaggaagaa
acattggcaggacttggtaggcaaagatccagtcatggccatttgcttctggcatatcag
aaaaagtag
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