Theobroma cacao (cacao): 18596867
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Entry
18596867 CDS
T02994
Name
(RefSeq) endonuclease MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
18596867
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tcc03400
]
18596867
DNA repair and recombination proteins [BR:
tcc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
18596867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
SR_plectin_7
DUF4743
kleA_kleC
Motif
Other DBs
NCBI-GeneID:
18596867
NCBI-ProteinID:
XP_007025648
UniProt:
A0AB32V0G4
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Position
6:complement(23905364..23910364)
Genome browser
AA seq
921 aa
AA seq
DB search
MQLPTQFLSLQNPPLLSHRHRHYSLSTRPFKLKLIGSLANSPESRSSELATALQSETLKT
LEWPSLCNYLSPFTSTSMALSLTKSAAFPIGQSQEESQKLLDQTTAALHAMEALKSEPLD
LSAIEDVSGILRSAGSGQLLTVRELCRVRRTLGAARAVSEKLAAVAEGGSLKRYTPLLEI
LQNCNFQKELEKKIGFCIDCNLSTVLDRASEELELIRAERKRNMGNLDSLLKEVSANVFQ
AGGIDRPLITKRRSRMCVGVRASHKYLLPDGVVLNVSSSGATYFMEPKEAVELNNMEVKL
SNSEKAEEMAILSLLTSEIAESEAEIKYLLDKLLEVDLAFAKAAYAQWMNGVCPIFSSTE
SEVLISNGADNAWSVDIEGIQHPLLLGSSLRNFTDFIASSSGDPSITEEKSGAMAAVKSS
KGVSSFPVPIDIKVQCGTRVVVISGPNTGGKTASMKTLGLASLMSKAGMYLPAKKQPRLP
WFDLVLADIGDSQSLERSLSTFSGHISRICEILEIASKESLVLIDEIGSGTDPLEGVALS
TSILQYLKTRVNLAVVTTHYADLSRLKGKDSQYENAALEFSLETLQPTYQILWGSIGNSN
ALTIANSIGFDKNIIERAKKWVDSLKPEKQQERKVVLYQSLMEERSRLEAQFRRAESLHA
EIMELYHEVRGEADNLEEREIALRAKETEKVQQELNAAKSQIDTVVLEFENLLKTANSDE
FNLLIRKSESAINSIVKAHRPGDSFSFTETDTSSYQPQSGEQVHVKGLGNKLATVVEASE
DDNTLLVQHGKIRVRVEKSNVRPISNGKKMARRSMKKRGEQSRELASNLDATNSAAIAYG
PLIQTSKNTVDLRGMRVAEAAHHLDMAISARGSNSVLFVVHGMGTGVVKEQALEILRNHP
RVAKYEQENPMNYGCTVAYIK
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgcaactccccactcagttcctttccctccaaaaccctccacttctctctcaccgccac
cgccactactctctctcgaccagacctttcaaactcaaactcatcggctcgcttgccaac
tcacccgagtcacgctcatccgaactcgcaaccgccctccaaagcgaaaccttgaaaacc
ttagaatggccttccctgtgcaattacctgtctcccttcacatctacctccatggcccta
tccctcaccaaaagcgccgcattccccatcggtcaatcccaggaagagtcccagaagctt
ctggaccaaaccaccgccgctttgcacgccatggaggccttgaaatcggagccgttggat
ctctctgccatcgaggacgtctcaggaatcctccgctctgctggttcaggacagctgcta
acagtcagggagctttgcagagttcggaggacgcttggcgccgcaagagccgtctcggag
aagttggcagcggtcgcagaaggaggttctttgaagaggtacactccattgcttgaaata
cttcagaattgcaatttccagaaggagttggagaaaaagataggattttgcatagactgc
aatctttcaactgtccttgatagagctagtgaagaattggagcttattagggctgaaagg
aagaggaacatgggaaatctggattctctattgaaagaagtatcagctaatgtttttcag
gctggaggcattgacagacctttgataaccaagcggcggtcaaggatgtgtgtgggtgtg
agggcttctcataaatatctgcttccagatggtgtggttctgaacgttagcagttctggt
gcaacatattttatggagcctaaagaggcagttgagttgaacaacatggaagtaaagctt
tcaaattctgaaaaagctgaggaaatggctattctgagcctgcttacatctgaaatagca
gaatcagaagctgagataaagtatttgttggataaacttctagaagttgatcttgctttt
gctaaagctgcatatgctcagtggatgaatggtgtctgtccaatttttagttcaacggaa
tctgaagttttaatttccaatggagcagataatgcttggtcagtagatattgaaggaata
cagcatccgcttctccttgggtcttctttaagaaatttcacagatttcattgcatccagc
tctggggatccgtctataacggaggagaaaagtggtgcaatggctgcagtaaagtcttca
aaaggagtatccagctttcctgttcctatagatattaaagttcaatgtggaacacgggtg
gtggttatctcaggacccaatacaggaggtaaaactgcttccatgaaaactttggggctg
gcatctcttatgtcaaaggctggcatgtatttgcctgctaagaagcagccaagacttccg
tggtttgatcttgttcttgcagatattggggacagccagtctttggaacgaagtctttca
acatttagtgggcatatatcacgaatttgtgagatcttggaaattgcctcaaaagaatca
cttgtcctcattgacgaaattggtagtggaactgatcctttagaaggggtggctctatct
accagtatcttgcagtatctcaaaactcgtgttaacttagctgttgtaacaactcattat
gcggatctaagtcgtcttaaagggaaggactctcagtacgagaatgcagccttggaattt
tctctggagaccttacaacctacctaccagatactctggggtagcatcggcaattcaaat
gcattaaccattgctaattcaattggttttgataaaaatataattgaacgtgcaaagaag
tgggtggacagtctaaagccagaaaagcagcaggagcggaaagttgtgctatatcaatcg
ctaatggaggaaaggagcagattggaagctcagttcaggagggctgaatctcttcatgct
gaaattatggaactttatcatgaggttaggggtgaggcagacaatcttgaagagcgtgag
atagctctcagggcaaaggaaaccgagaaggttcaacaagaattaaatgctgcaaaatct
caaattgacactgtggtgctggagtttgagaatctgctcaaaactgccaattctgatgaa
tttaatttgctgattcggaaatctgaatctgcaattaactccattgtaaaagctcaccgc
cctggtgacagtttctcttttactgaaacagatacaagttcatatcaacctcagtctggt
gagcaagtccatgtgaagggattaggaaacaaattagctactgttgttgaagcatctgag
gatgacaacacattattagtccaacatggtaaaattagggtccgggttgagaagagcaat
gttagacctatttcaaatggcaaaaaaatggcgaggcggagtatgaaaaaacggggagaa
cagagcagagagttagcgagtaatttagatgctacaaacagtgctgcaattgcttacggc
ccattaattcagacatcaaagaacactgtagatctccgtggtatgcgagtggcagaggct
gcgcaccacctcgacatggccatctctgcgagaggatcaaattcggttctctttgttgtg
catggcatgggcactggtgtcgttaaggagcaagcactggaaatattaagaaatcatcca
cgtgtggcgaagtatgaacaggaaaatccaatgaattatggttgtacagttgcttacata
aagtga
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