KEGG   Theobroma cacao (cacao): 18596920
Entry
18596920          CDS       T02994                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
tcc  Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:tcc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:tcc04812]
    18596920
Cytoskeleton proteins [BR:tcc04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     18596920
SSDB
Motif
Pfam: Katanin_con80 WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_SCAP ANAPC4_WD40 Beta-prop_SPT8 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_DCAF4 NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_EIPR1 eIF2A Beta-prop_IFT122_1st Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_IP5PC_F Beta-prop_VPS8 Beta-prop_HPS5 WD_LRWD1 Mcp40H-20_sensor
Other DBs
NCBI-GeneID: 18596920
NCBI-ProteinID: XP_017978684
UniProt: A0AB32WLH7
LinkDB
Position
6:24229785..24237205
AA seq 961 aa
MAKRGYKLQEFVAHTANVNCLSMGKKTRRLLITGGDDHKVNVWAIGKPTSLMSLCGHTSP
VESLAFDSAEVLVLAGASTGVIKLWDLEETKMVRGLTGHRSNCTAMEFHPFGEFFASGSM
DTNLKIWDIRKKGCIHTYKGHTRGISTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF
KFHEGHIHSIEFHPLEFLLATGSADRTVKFWDLETFELIGSSRPEATGVRSITFHPDGRT
LFCGLDDDLKVYSWEPVVCHDSVDMGWSTLGDLCINEGKLLGCSFYRNSVGVWVADVAHI
EPYGRNDLTEKKFNLEGSYSLEKAGCGMRSTLGSRPMSPDYDTKEIKNIYVDTAGSNPPI
TSHKAGSLNSPKVVFPFDASEISNLAAEKQSPGTGVNAKSNGQSGNKSFITPSAVPQDSP
LGKDSINSGKESITFSRTKPGMLLRPAHVRRPSVNKFEVEKLSAAVESGTLSNTKSALDS
SMDLNSQTRLVSEDRARKSCDEKDSNIKSVTEKSEKKLSAKTPPNQETCNESLNCNKDSN
SVKFVNGVAVVPGRTRTLVEKFERRERLNSSGDPTTNSTLPVVPETDSTPAIMKGGTQIS
EAQSISANDGKSAESLISRTKSTSGSEGSITGSQIPRRESNPTSDGIITGDQISRRELTV
TPDRIITGNQISRKESTITPDRIIPGNQISRREPNSSPSGGIFTGSQISRRESTSASDGI
IAGNQISRRESTSVSDGIISRREATYANDRNGPSGSITENQISRRGLSSANDVNVTIIES
QISKGESISANDGNITESLMQTHDSFLSTLRSRLTKLQVVRHFWEKNDIKGAIGALRKLP
DHSVQADVISVLMEKMEILTLDLFSGLIPVLMGLLDSKMERHVNVSLEMLLKLVAVFGPM
IRSTVSARRGVGVDLHAEQRRECCNQCFMQLQKIQKLLPPLVRRGGAIARCAEELNLVLQ
E
NT seq 2886 nt   +upstreamnt  +downstreamnt
atggcgaagcgtggatataagctgcaggaatttgtggcacataccgcaaatgtgaattgt
ctaagtatgggaaaaaagacacgtaggcttcttattacaggcggagatgatcataaagtc
aatgtttgggcaattgggaaacccacttctctgatgagtctttgtggtcatactagtcca
gtggaatctttagcttttgattcggcagaagtcttggtgcttgctggagcatctacaggt
gtgataaagctttgggatctggaagaaacaaagatggttcgaggactaaccggtcacaga
tctaattgcactgccatggaattccatccatttggtgagttctttgcatctggttccatg
gacacaaatctaaagatttgggatatcagaaaaaagggatgcattcacacatacaagggc
catactcgaggcattagtacaattagattcactcctgatggtcgctgggtagtttctggt
ggatttgataatgttgtaaaggtgtgggatcttactgctggaaaactgttgcatgatttc
aagtttcatgaagggcatattcactccatagaattccatcctcttgagtttctcctggcc
acaggttcagcagacagaacagtaaagttctgggatttagaaacctttgaactgattgga
tcttccagacctgaggccacaggggttcgctcaattacctttcatcctgatggaagaacc
ctattctgtggattagatgatgatttgaaggtttattcatgggagccggtagtttgccat
gattctgttgatatgggatggtcaacgcttggtgacctctgcattaatgaaggcaaactt
ttgggttgctcgttctatcggaattctgttggggtttgggtagcagatgtagcgcatatt
gagccatatggacgaaatgacctcacggagaagaaatttaatcttgaaggaagttattct
ttggagaaagcagggtgtggaatgaggtcaactttgggatcacggcccatgtctcctgat
tatgacacaaaggaaataaagaacatatatgttgacactgctggcagtaatcctcctatt
acttcacataaagctggctctttaaattctccaaaagtggtattcccattcgatgccagt
gaaataagtaatcttgcagctgagaagcagagtcctggaacaggtgttaacgctaaatct
aatggacaatcaggtaacaagtcttttatcacacctagtgctgtaccacaggacagccct
cttgggaaagactctatcaattccggaaaagaatctatcaccttttcaaggacaaaacca
ggcatgttgctcagaccagctcatgttagaagaccgtctgttaacaagttcgaggttgaa
aagctgtcagctgcagttgaatcaggaactcttagcaatacaaaaagtgcgttagacagc
tcaatggatctgaattctcaaactaggcttgtatcagaggacagagctagaaaatcctgt
gatgaaaaggattcaaacatcaagagtgttacagagaaatctgaaaagaagttatcagca
aagacaccccctaatcaagaaacttgtaatgaatccctcaattgcaacaaagactcaaac
tctgtcaaatttgtcaatggagtggctgttgttccagggagaacacgcactctggttgag
aagttcgaacgaagagagagattaaacagcagtggtgatccaacaactaacagtacattg
cctgtggtacctgaaacagatagtacaccagccataatgaaaggagggacacaaatctct
gaagcacaatcaatctctgccaatgatgggaaaagtgctgaaagtctaatttctagaaca
aaatcaacttctggctctgagggaagcattactggaagtcagattcctaggagggaatca
aaccccacttctgatgggatcattactggagatcaaatttctagaagggaattaactgtc
acccctgataggatcattactggaaatcaaatttctagaaaggaatcaaccatcacccct
gataggatcattcctggaaatcagatttctagaagggaaccaaactcttctccatctggt
ggcatctttactggaagtcaaatttctagaagggagtcaacctctgcttccgatgggatt
attgctggaaaccaaatttctagaagggaatcaacttctgtttctgatgggatcatttct
agaagggaagcaacctatgctaatgataggaatggaccaagtggttctattactgaaaat
caaatttctaggaggggattgagttctgctaatgatgtgaatgtcactattattgaaagc
caaatttcaaagggggaatcaatctctgctaatgatggaaacataactgaaagtctgatg
caaacacatgattcattcttaagcactcttcgatcacgcttgacaaagttgcaggtggtg
cggcatttttgggaaaagaatgacattaaaggtgcaattggtgccttgcggaagctacca
gatcattctgtgcaagcagatgtaatcagtgttctcatggaaaaaatggagattctcacc
ttagatctgttttctggcctaattcctgtgcttatgggcttattagatagcaaaatggaa
aggcatgtaaatgtctcattggagatgctcctgaagcttgtagcagtttttggtccaatg
atacgctctactgtttcagcccgacgtggtgttggcgttgatcttcatgctgagcagagg
cgggaatgttgcaatcaatgttttatgcagctgcaaaagattcagaaacttcttccacca
cttgtaaggagaggtggtgccatagcaagatgtgccgaggaattgaatttagttcttcaa
gaatga

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