Theobroma cacao (cacao): 18596962
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Entry
18596962 CDS
T02994
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
18596962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tcc04121
]
18596962
Ubiquitin system [BR:
tcc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
18596962
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_6
LRR_4
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
18596962
NCBI-ProteinID:
XP_017978719
UniProt:
A0AB32WLA2
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Position
6:24429923..24433762
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AA seq
586 aa
AA seq
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MESSEVNMSRDSSELDESARGSSSPDLALERVLSLLKSHRDRSSVSLVCKDWYNAERWSR
THVFIGNCYSVSPEIVARRFPKIRSVTLKGKPRFSDFNLVPQNWGADIHPWLVVFAAKYP
FLEELRLKRMTISDESLEFLAVSFPNFKALSLLSCDGFSTDGLAIIATHCKNLTELDIQE
NGIDDKGGSWLSCFPESFTSLEALNFANLTSDINFDALERLVGRCKSMRVLKVNRSISLE
QLQRLLVNALQLAELGTGSFSQELTFRQYEELESTLSSSKNIHTLSGLWEAKGLHLPALY
PVCTHLTFLSLSYAPLQSGELAKLLAHCPQLRRLWVLDTVEDEGLEAVGSSCPLLEELRV
FPADPFDEDIIHGVTEAGFVAVSYGCPRLHYVLYFCRQMTNAAVATIVQNCPDFTHFRLC
IMDPGQPDYLTNEPMDEAFGAVVKTCTKLQRLSVSGLLTDLTFEYIGRYAKNLETLSVAF
AGSSDWGMQCVLTGCPKLRKLEIRDCPFGNAALLSGLDKYESMRSLWMSACHVTMDGCRQ
LAREMPRLNVEVMKEDGSDDSEADKVYVYRSIAGPRRDAPPFVLTL
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgtcggaggtgaatatgtcgagagactcgtccgagttggacgagtccgctcgg
ggatcctcatcacccgacctagcgctcgagcgagttctatctcttttgaaatctcacagg
gacaggagctccgtttctctggtctgcaaggactggtacaacgcggaacggtggtcgagg
actcacgttttcatcggaaactgttactccgtctcgccggagatcgtcgcacggcggttc
ccgaaaatccggagcgtgacgttgaaagggaagcctaggttttccgacttcaacttggtg
ccgcagaactggggggccgatatccacccttggctggtcgttttcgccgctaaatatccg
ttcctcgaagagctcaggcttaagcgaatgacaatcagcgacgaaagcttggagttttta
gccgtttcttttcccaacttcaaagctctctcgcttttaagctgcgacggttttagcact
gacggactcgccatcattgccactcattgcaagaacttgactgagctggacatacaggag
aatggcattgatgataaaggaggtagttggttgagctgcttccctgaaagcttcacatca
ttggaagcactgaactttgccaacttgaccagtgatattaatttcgatgctcttgagagg
cttgtaggtaggtgcaagtcaatgagggttttaaaggtcaacaggagcatatccttggaa
caattacaaagacttcttgttaatgctcttcaattggccgagcttggtacaggctcattc
tcacaagaacttactttccgccaatatgaagagcttgaaagcacattaagtagctccaag
aatattcatacactatctggtttgtgggaggccaagggcttacatctccctgctttatac
cctgtgtgcacacatctgactttcttgagcttgagctatgctcctttgcaaagtggtgaa
ctcgctaagcttcttgctcattgtccacaacttcgacgcctctgggtcttggacacagta
gaagacgaaggactggaagccgttggatcgagctgccctttgcttgaagaacttagagtt
ttccctgctgatccctttgatgaggatattatccatggagtcactgaagctgggtttgtt
gctgtgtcttatggttgcccaagactccactatgtcctctatttttgtcggcagatgact
aatgcagctgtagcaaccattgtacagaactgccctgattttacgcatttccgattatgc
ataatggacccaggtcaaccagattatctcacaaatgaacccatggatgaagcttttggt
gcagtggttaagacatgcactaaactccagaggctttcagtttcaggtctcttaaccgat
ctgacatttgagtatattggaaggtatgcgaagaacttggagaccctttcagtggctttt
gcaggcagcagtgactgggggatgcagtgtgttctgacaggttgtccgaaactaaggaaa
cttgagataagagactgcccatttggcaatgcagcactgctgtcaggtttggacaagtat
gagtccatgaggtcactttggatgtcagcctgccatgtgacaatggatggctgcaggcaa
ttggcaagggagatgcccagattgaatgttgaggtaatgaaggaggatggaagtgatgat
agtgaagctgataaagtctatgtttatcgttctattgcaggcccaaggagggatgcccca
ccatttgtgcttactctctga
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