Theobroma cacao (cacao): 18597274
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Entry
18597274 CDS
T02994
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18597274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tcc03041
]
18597274
Spliceosome [BR:
tcc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
18597274
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Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
YonK
Motif
Other DBs
NCBI-GeneID:
18597274
NCBI-ProteinID:
XP_007026259
UniProt:
A0A061GH26
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All DBs
Position
6:complement(25791457..25795553)
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AA seq
557 aa
AA seq
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MMKTKRDDGNSEDWRGDSKRRKVVDWPSSPSEEPLVPYNDDEDDERRALGRVGGGEQDGE
ARSEGNGQGVKSEEDEDDSDDPYGQGSFLGKQNRQVEVRRDCPYLDTVNRQVLDFDFERF
CSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEIND
PSLDDIRHVLNPRFTREQVEQLDKNKQWSRALDGSDYLPGMVGLNNIQKTDFVNVTIQSL
MRVTPLRNFFLIPENYQHCKSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKR
FRIGVQSEPVEFMSWLLNTLHANLRTSKKSSSIIHKCFQGELEVVKETQNKAITEKKESG
EEQNGAPKITDGAIEKHNVGAETYRMSFLMLGLDLPEPPLFKDVMEKNIIPQVPLFNILK
KFDGETVTTTVRPPARMRYRVTRLPQYLILHMGRFTRNNFFREKNPTLVNFPVKNLELKD
YIPLPAPTKENEKLRTKYDLIANIVHDGKPDEGFYRVFVQRKSEELWYEMQDLHVSETLP
QMVALSEAYMQIYEQQQ
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaacaaagagggatgatggtaatagtgaagactggagaggggactcgaaacgg
cgtaaagttgtggattggccatcttcaccttctgaagagccacttgtgccttacaatgat
gatgaagatgatgaaaggagggcattgggtcgcgtaggcggtggagaacaagatggtgaa
gcaaggtcagaagggaatggtcagggagttaaaagtgaagaagatgaagatgacagtgat
gatccatatgggcaaggatcatttctggggaagcaaaatcgccaggttgaagtacgaaga
gactgcccttaccttgatactgttaatcgccaggtgctggattttgattttgagaggttt
tgttcggtctctttgtcaaatttgaatgtgtatgcatgcctggtctgtgggaagtattac
caaggaagagggaagaagtcccatgcttatactcatagtctagaagcaggacatcatgtc
tacatcaatcttcgaacagagaaggtgtattgtcttcccgatgggtatgaaattaatgac
ccatcattggatgatatacgccatgttctaaatccaaggtttaccagagaacaagttgaa
caacttgacaagaacaagcaatggtctagagcacttgatggttcagattaccttccggga
atggtggggctgaataatattcaaaagactgattttgtcaatgtcacaattcaatcttta
atgagagttactcccttaaggaactttttccttatccctgaaaattaccagcactgtaaa
tctccacttgttcatcgatttggggaactcacacgaaagatttggcatgctcgaaacttt
aaaggacaggttagccctcatgagtttctacaggcagttatgaaagccagtaaaaaacgg
tttcggataggtgtgcagtctgagcctgttgaattcatgtcatggcttctcaatacacta
catgcaaatctaagaacttcaaagaaaagtagcagcatcatccataagtgctttcagggg
gaattggaggttgtaaaagagacacagaacaaagctatcactgagaagaaagaaagtggt
gaggaacaaaatggagctccaaaaattacagatggtgcaattgagaagcataatgttggt
gctgaaacttacagaatgtcctttttgatgcttggattggatttgccagaaccacctctt
ttcaaagatgtgatggagaaaaatataatacctcaggttcctctgttcaatatactgaag
aagtttgatggtgaaactgtaacaactacagttcgtcctccagcaaggatgagatatcgt
gtcaccagattgccacagtacttgatacttcacatgggccgctttactaggaataatttc
ttcagagaaaagaacccaacattggtgaactttcctgtgaaaaacctggagttgaaggac
tacattcctctgccagcaccaaccaaagagaatgaaaagttgcgcaccaagtatgatctg
attgctaatattgttcacgatggtaagcctgacgaggggttctacagggtctttgtacag
cggaagtcagaagaactatggtatgagatgcaagatctgcatgtttctgaaacccttcct
cagatggttgcactgtccgaagcttatatgcagatatacgagcagcaacagtag
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