Theobroma cacao (cacao): 18597296
Help
Entry
18597296 CDS
T02994
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
18597296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcc03019
]
18597296
Messenger RNA biogenesis [BR:
tcc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
18597296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
18597296
NCBI-ProteinID:
XP_017978601
UniProt:
A0A061GHM1
A0AB32WGB9
LinkDB
All DBs
Position
6:complement(25882153..25886505)
Genome browser
AA seq
476 aa
AA seq
DB search
MEMELGKLFIGGISWDTNEDRLREYFQAFGDVVEAVIMRDRATGRARGFGFVVFADPAIA
ERVVMEKHMIDGRTVEAKKAVPRDDQNILNKSNVSIHGSPGPARTKKIFVGGLASTVTES
DFKRYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLQRTFHELNGKMVEVKR
AVPKESSPGPSRNQLGGYNFGLSRVNSFLNGYMQGYNTSSVGGYGFRMEGRFSPVTAGRS
GFPPLSPGYGMGLNFESNLSPSYGGSSNLGSNLSYGRGLYTSFNGNSNRFGSPFGYGGGS
GGNSSILNSAGRNMWGNGSFNYATNSTTSSAIVGSGSGNSGVSSFGSIGALWDSSPSLGQ
GGGAASAYNGGNLRYGSGDFGVGSGGIGYGRNSNVAQLSTHGASNGGYDGAYANIYENGS
FYGDSTWRSSPSDLERSSSFGFGLGDASSDVMTNNSADYIGGYSVTNRQANRGIAA
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggagcttgggaagctattcattggtgggatttcttgggacacaaatgaggac
cgtcttcgagagtattttcaagcttttggggatgttgtggaagctgtgataatgagggat
cgggctactggtcgtgctcgcggattcgggtttgttgtttttgctgacccggctattgca
gaaagagttgttatggaaaagcacatgatagatggtagaactgttgaggcaaagaaggca
gttcctagggatgaccagaacatactaaacaagagcaatgttagcattcatggatcacct
ggtcctgctcgcacaaaaaagatatttgtaggaggcttagcatccacagtcactgagagt
gactttaagaggtactttgatcagtttggtacaattacagatgttgttgtgatgtatgat
cacaacactcagaggccacgaggttttggattcattacttatgattcagaggaagctgtc
gataaagtcttgcagagaacatttcatgaactcaatggaaaaatggttgaggtcaagcgg
gctgtccccaaagaatcatctccggggccaagtcggaaccagttaggtgggtataacttt
ggtctgagtagagtcaatagcttccttaatggctacatgcagggttataatactagttca
gttggaggttatggttttagaatggaaggtagatttagtccagttactgctggtcggagt
ggatttcctccattgagtcctggttatgggatgggactgaattttgagtcaaatttgagt
ccaagctacggaggaagctcaaaccttggttctaacctcagctatggacggggattgtac
acttcatttaatggaaattcaaacaggtttggtagcccctttggatatggtgggggcagt
ggaggaaatagttctatcttaaactcagcaggtcgaaatatgtggggaaatggaagtttt
aactatgctactaactccacaacctctagtgccattgtgggctctggaagtgggaattca
ggagtgagttcttttggcagcataggtgcactttgggattcctctcctagtttaggtcaa
ggtggaggtgctgcttctgcttataatggtggcaatcttagatatggaagtggagatttt
ggtgttggatcaggagggataggctatggaagaaacagcaatgttgctcagttatcaacc
catggtgcttcaaatggtggttatgacggggcttatgccaatatttatgaaaatggttca
ttttatggggattccacttggcgatcttcaccctcagacctagagcggtctagttctttt
ggttttgggctgggagatgcaagttcagatgttatgactaataactctgctgattacatt
ggtggttatagtgttaccaataggcaggcaaatagagggattgctgcatag
DBGET
integrated database retrieval system
