Theobroma cacao (cacao): 18597401
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Entry
18597401 CDS
T02994
Name
(RefSeq) la-related protein 6B
KO
K15191
La-related protein 7
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcc03021
]
18597401
Transcription machinery [BR:
tcc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
7SK RNP complex
18597401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
La
RRM_1
PAM2
Motif
Other DBs
NCBI-GeneID:
18597401
NCBI-ProteinID:
XP_007026487
UniProt:
A0AB32V1G6
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Position
5:56174..60457
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AA seq
499 aa
AA seq
DB search
MAQPETLDSPLSASSSSDPQLSRNLSSSRLNAQAPEFVPTRSTPQQQQQQQQQQQQQQQQ
QQQQQSHRMMIPPPPPPAMLHVYPPPPPPPAAFHLPVHSPVPMPPHMVPVPHHMPMRNHH
HHHHHPPFQNHPHHHREQEVEAVVKKDHHKEQHKEHKDHGASCSKNGLSEEATLKILNQV
EYYFSDLNLATTDHLMRFINKDPEGYVPISVVASFKKIKALITTHAQLATVLRNSLKLVV
SEDGKKVRRQHPLTELDMEELQSRIIVAENLPEDHCHQNLMKIFSSVGSVKTIRTCQPQP
SGGGVSSASRTAKSDGMHFSNKLHAFVEYESVELAEKAVAELNDEGNWRSGLRVRLMLRR
VSKPAHTRGKKSHDGEGHYEEDDASTSEQQSNDKQQEDPSQLSDIHSHEYPGEEHSNEKE
GGQKKGRNRGRGKGRGRAQYHNNQHNSRGNHVGTPPSATSNLVSNEQATVAKQPPGPRMP
DGTRGFAMGRGKPVAVNTA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggcccagcccgaaaccctagattctccgctatcagcatcttcttcgtcagatccacaa
ctgtcgcggaacttgtcatccagtcgactcaacgctcaggcgcctgagtttgtgcctact
cgctctacgcctcagcagcagcagcagcagcaacagcaacagcaacagcagcagcagcag
cagcagcagcagcaaagtcataggatgatgatccctcctcctccgccccctgcgatgctg
cacgtctaccctcctcctccgcctccgccggcggcgtttcacctccccgtccatagccca
gtgcctatgccgcctcacatggtccccgtgccccatcatatgcccatgcggaatcatcac
caccatcatcatcatcctccgtttcagaatcatcctcatcatcatcgagagcaagaagtt
gaggctgttgtgaagaaagatcaccacaaggagcagcataaggagcacaaggatcacggt
gcttcttgctccaaaaatgggctatccgaagaagctaccctaaagattttgaatcaggtt
gagtactattttagtgatttgaacttggccaccaccgatcatcttatgaggtttatcaac
aaggatccggaaggatatgtgccaatatctgttgttgcatcttttaagaagattaaagcc
ctcataactactcatgcccagctagctactgttttgcggaactcgttgaagcttgttgtt
agcgaagatggaaagaaagtaagacgccagcatcccttaactgaattggatatggaagag
ttgcaatctcgtataattgttgctgaaaatttgcccgaggatcactgccaccaaaacctc
atgaagatattctcttctgttgggagtgtgaagacaattcgtacctgtcagcctcaaccc
tctggtggtggggtttcttcagcatctaggacagcaaaaagtgatggcatgcattttagt
aacaagttgcatgcatttgtggaatatgaatctgttgagctggctgagaaagcagtagca
gagctgaatgatgagggaaattggaggagtggccttagggtccgcctaatgcttagacgt
gtgtcgaaacctgctcatacaagagggaagaagagccatgatggggaaggtcattatgag
gaagatgatgcttcaacatccgagcagcagtcaaatgataaacaacaagaagatccatct
cagttgtctgatatccattcacatgagtatcctggagaggagcattccaatgagaaagag
ggtgggcagaaaaaagggcgaaacagaggccggggcaaaggacgtgggcgggctcaatac
cataataaccaacataatagtcgtggaaatcatgtgggcactcccccttcagcaacaagt
aatttggtcagtaacgagcaagcgactgtagcaaagcagccccctggtcctcgaatgcca
gatggcacaagaggatttgctatgggtcgggggaagccggttgctgttaatacggcgtga
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