Theobroma cacao (cacao): 18597460
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Entry
18597460 CDS
T02994
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B
KO
K08775
breast cancer 2 susceptibility protein
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03440
Homologous recombination
tcc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
18597460
03460 Fanconi anemia pathway
18597460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tcc04121
]
18597460
03036 Chromosome and associated proteins [BR:
tcc03036
]
18597460
03400 DNA repair and recombination proteins [BR:
tcc03400
]
18597460
Ubiquitin system [BR:
tcc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
18597460
Chromosome and associated proteins [BR:
tcc03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
18597460
DNA repair and recombination proteins [BR:
tcc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
18597460
FA (Fanconi anemia) pathway
Downstream FA components
18597460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Tower
Motif
Other DBs
NCBI-GeneID:
18597460
NCBI-ProteinID:
XP_007026582
UniProt:
A0AB32V1D4
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Position
5:329842..338386
Genome browser
AA seq
1105 aa
AA seq
DB search
MSTWQIFSDAGNDFRWEVSGRILPSKPDDEPNRAPVPPLPSMADLLLQGCSKLIENGDAG
VGKCPMFRTGLGKSVALKESSIAKALSILGDDDVGTAVTSSEVVPGNNGFGCTNSLFQTG
SGKMVNISSAGLVRAKTLLGLEQDNEHHSFEGFQHPKKLRATNEPCGWQSFSHSEKKEGL
RNTGVADFFSESRHLLNSRNGFVGSTVGSENDSTPVHSKEFDSAPKPPPIKFHTAGGRSL
SVSSDALKRARSLLGDPELGNFFGEVEEEVPPFTVSEEKFNDASSNKENHFFTSFSLQGT
IKSKDTSKDFISPLKASFKQMRSIFNSEKICCGSNLIDKFDAVGNSNACMSTTNMPSAQK
PLSNSTSEKNLVTNISLPRLGKSFGGPLADISNNIVTSQTNNKRIMTEKKRIGRSSFISP
YKRPRCSEFSTPLNKGVSFVDDHSCCKRTVSTKYPFQVPRVYMKEYFAVPPSACSMLECL
SDQEKQIKPDNAVKYMFKDESGLSRIGAEAFYDMLAHSGASMQYISKEWVANHYKWIVWK
LVCYERCYPSKCAGNFLTISNVLEELKYRYDREVNHAHRSAIKRILEGDASPSTMLVLCI
SNIQSNSEPKMETNLLITNGADNSGNAKVELTDGWYSMDAVLDVLLSKQLAAGKLFVGQK
LRIWGAGLCGWVGPVSPLEASSAISLLLNINGTFRAHWADRLGFCKGVGTPLAFRCIKSD
GGPVPWTLVGVTRIYPVLYRERLSNGGSIVRSERMESRMVQQHNQRGSVVVDHVISEYQR
GVNSSHILSDSESEGAKILKILETAAEPEVLMAEMSPEQLTSFATYKSKLEATRQLEMEK
SIKKALAEAGLNERDVVPFIRVRVVGLTTRKYHGKGRPKEGIITIWNPTEKQKSELVEGQ
AYVVAGLIPIYSDSEALYLQARGSTTKWQPLSPMAMECFEPFFSPRKPTKLSNLGEIPLS
SEFDIAVYVVYVGEVYTAAHQKKQWVFVTDDSISNLLSEGLSDSLLAISFCSPCIDKDSF
APINSNLVGSMVGFCNLIKKAKDQMNHLWVAEAAENCAYFLNLNPSICSHLKIAGASVQT
WAKASNSIIDKLREKVLFILDNCGG
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtggcagatattctctgacgccggaaacgatttccggtgggaggtttccggt
cgtatcctcccgtctaaaccagacgatgagccgaaccgcgctcctgttcctccactccct
tccatggccgatctcctgcttcaaggatgctcgaagcttattgagaacggagatgcagga
gtcgggaaatgtccgatgtttagaaccggattaggtaaatcggtggctttgaaagagtct
tccattgcaaaagcattgtctattcttggcgacgatgacgttggcactgctgttacttca
agcgaagtggttcccggaaacaatggattcggctgcactaactctctttttcaaacgggc
tctgggaaaatggttaacatatcttcagctggtttggtcagagctaagacattgctggga
ctggaacaagataatgagcatcacagttttgaaggttttcaacatccaaagaagttacgt
gcaactaatgaaccttgtgggtggcaaagtttttctcattcagagaaaaaagaaggttta
cgaaatactggggttgcggattttttttcagaatcaaggcacttgttaaactctaggaat
ggttttgtaggaagtacagtaggcagtgaaaatgactcaacgccagtgcattccaaagag
tttgattcagctcccaagccacctccaatcaagtttcatactgctggtggaaggtcgtta
tcagtttcaagtgatgcattgaagcgtgcaaggagtcttcttggtgatccagagctaggg
aatttctttggtgaagtagaagaagaggttccaccgtttactgtttcagaggaaaagttt
aatgatgcttcatcaaacaaggaaaaccattttttcacttccttttcccttcaaggaaca
ataaagagtaaagatacatccaaggattttatatctccactgaaagcatctttcaagcaa
atgaggtccatatttaattcagaaaaaatatgttgtgggagtaacttgattgacaaattt
gatgcagttggaaattctaatgcatgtatgtcgaccaccaatatgccttctgctcagaag
cctttaagcaatagtacttctgagaaaaatttggtaacgaacatttcgttgccaaggctt
ggaaagtcatttggcggcccattggctgatatttcaaataacattgtcacatctcaaaca
aataacaaacggattatgactgaaaagaagcgaattggaagatcaagttttatttctcca
tacaagagaccccgctgttctgaattctctactccattgaataaaggtgtttcctttgta
gatgatcattcatgttgcaaaagaacagtttccactaaatatccatttcaagtgccaaga
gtatatatgaaggaatattttgcagtgcctccatcagcctgcagcatgttggagtgtttg
tcagaccaagagaaacagatcaaaccagacaatgcagttaagtatatgtttaaagatgaa
tctggcttaagtcgcattggggcagaagctttttatgacatgttggctcattctggagct
tctatgcaatacatttctaaagagtgggttgcaaatcactataagtggattgtctggaaa
cttgtgtgttatgagaggtgctatccttcaaaatgtgctggaaattttttgactatctcc
aatgtcctcgaggaactaaagtacagatacgatagggaagtaaatcatgcacaccgttct
gcaataaaaagaatacttgaaggggatgcttcgccttctacaatgttggtactatgcatt
tcaaatattcagtcaaattctgaaccaaagatggagacaaatctattgattacaaatgga
gctgataatagcggtaatgcaaaagtggaactaacagatgggtggtattcaatggatgct
gttttggatgtattgctatcaaaacagcttgctgctggaaagttatttgtgggacagaaa
cttcggatctggggagcaggattgtgtggctgggttgggcctgtttcaccccttgaggca
tcaagtgcaataagtttacttttgaacataaatgggacatttagagctcattgggctgat
cggctgggattttgcaagggtgttggtactcctttggcatttaggtgcatcaaaagtgat
ggaggtccagtgccttggactttagtaggagtcactcggatataccctgttctctacagg
gagaggttgagtaatggggggtcaattgtcagatccgaaaggatggagagtagaatggtt
caacagcacaaccaaaggggctcggttgttgtagatcacgttatatctgagtatcaaaga
ggggtcaacagttctcatatccttagtgacagtgagagtgaaggagcaaaaatcttgaaa
attcttgagacagctgctgagccagaagtcttaatggcagaaatgagcccagagcaacta
acttcctttgctacatataaatcaaaacttgaggcaaccaggcagttagagatggagaaa
tcaatcaagaaagctctggcagaagctggcttaaatgagcgagatgttgtcccattcata
agggtgagagttgttggattaaccactaggaaatatcatggaaagggaagacctaaagaa
ggcataataaccatttggaatcctacagaaaagcagaaaagcgagctggttgaggggcag
gcatacgtcgttgctgggcttataccaatatactcagattcagaagccctttatttacaa
gcccgtggatctaccactaaatggcagcctttatctcccatggcaatggaatgctttgag
ccatttttcagtccgcgaaagccaacgaaattgtcaaatttaggtgaaattcctctttcc
agtgagtttgacattgctgtatatgttgtgtacgtgggggaagtctatacggctgctcat
caaaagaaacagtgggtgtttgtgacagatgattccatttcaaatttactgtcagaagga
ttatcagattctttacttgccatcagcttttgctcaccatgcattgataaggactcattt
gctccaatcaactctaacctagtgggatccatggtagggttctgtaaccttatcaagaaa
gcaaaggatcaaatgaatcatctctgggttgccgaagcagcagaaaattgtgcatacttt
ttaaatttgaatccctcaatttgttctcaccttaaaattgctggtgcctcagttcagaca
tgggcaaaggcctctaactcgattattgacaaactcagggagaaggttttatttattctt
gacaattgtggaggctaa
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integrated database retrieval system