Theobroma cacao (cacao): 18597500
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Entry
18597500 CDS
T02994
Name
(RefSeq) transcription factor bHLH140
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
18597500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tcc03400
]
18597500
Enzymes [BR:
tcc01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
18597500
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
18597500
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
18597500
DNA repair and recombination proteins [BR:
tcc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
18597500
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
18597500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
Macro
AAA_33
zf-C2HE
HIT
AAA_18
Zeta_toxin
AAA_29
AAA_16
AAA_17
AAA
Viral_helicase1
AAA_22
Motif
Other DBs
NCBI-GeneID:
18597500
NCBI-ProteinID:
XP_017976841
UniProt:
A0AB32WG75
LinkDB
All DBs
Position
5:502437..508191
Genome browser
AA seq
1000 aa
AA seq
DB search
MEMDIDGACKPKEKEGEEEKEKGKPIVAMLVGAPGSGKSTFCDNVMRASSRPWVRICQDT
INNGKAGTKLQCLNSAAASLKGGKSVFIDRCNLDKEQRLDFVKLGGPQVEVHAVVLDLPA
KLCISRIVKRTGHEGNLQGGKAAAVVNRMLQNKELPNLSEGFSRITFCQNEADVQAAVNT
YTALGSLDILPHGCFGQKNPNAKTQLSILKFLKRPHETNSQDSEPSQLSKGKGPCSKSQE
TVSSLSGAASQKIKVSEDPVAGFISQHDDDFPTLAFPSISTADFQFNLEKASNIIVEKVE
EFIDKLGNARLVLVDLTHGSKILSSVRAKAGEKNIDSKRFFTFVGDITQLYSKGGLRCNV
IANAANWRLKPGGGGVNAAIFNAGGPALEAATTDRAKSLLPGNALVVPLPSISPLYSKEG
VTHVIHVLGPNMNPHRPNCLDNDYTKGCKVLRDAYSSLFEGFLSIAKTQVKFPSRSSQSI
QLELSISEDKTENILRNHFSHSDQEIKEYGNYESDRSKQCKESENEVVVVMGKEQEMVLS
LSGAASEKIKVIEEPAASSISQRGFDVPTLAFPSISTADFKFNLEKASNIIVEKIEEFMD
RLGNARLVLVDLTHRSEILSLVRAKAAQKNIDSKSFFTFVGDITRLNSEGGLHCNVIANA
ANWRLKPGGGGVNAAIFNAGGSGLEAATKNQAMSLLPGTAVVVPLPSISPLSIREGVTHV
IHVLGPNMNPERPNCLDDDYIKGCKILQDAYSSLFEGFLSIAKTQAKFPKRSSKSILSEP
SVPEDKIIGTMTKTWAPWVQSLYNIAMQPEKYKDEVLEASDDVVVLNDKYPKAKQHLLVL
ARFEGLDCLADARKEHLQLLTTMHAMGLKWAEKFLHEDAALVFRLGYHSVPSMRQLHLHV
ISQDFDSKHLKNKKHWNSFNAAFFRDSLDVIEEVSNHGKATLQDDNRLMSMELRCHRCRS
AHPNMARLKSHISNCQAPFPAALQENGRLVLAQSNSGCDP
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggacatcgatggcgcctgtaaacccaaagagaaagaaggtgaagaagagaag
gaaaaggggaagccgatcgtggcaatgttggtgggcgcaccaggaagtggcaagtccact
ttttgcgacaacgtcatgcgagcttcttcacgtccctgggttcgcatctgccaggataca
atcaataacggcaaggctgggacaaagctgcagtgcttaaatagtgcagctgcttcactc
aaggggggcaagagtgtgttcattgatagatgcaacttagataaagagcagcgcctggat
tttgtgaagcttggtggtccgcaagtagaggtgcatgctgtggtgcttgacctccctgcc
aagctttgtatatctcgcatagttaaacgtactgggcatgagggaaatcttcaaggtgga
aaagctgcagcagttgtgaataggatgttgcaaaacaaagaattgcccaatttgagtgaa
gggttctctcgaatcacattttgccagaatgaggccgatgttcaagctgctgttaacacc
tacactgcactcggctctttggacatccttccacatggttgttttggtcagaagaatcct
aatgccaaaactcaacttagcatattgaagttcttaaagagaccgcatgaaacaaatagt
caggattctgagccttctcaacttagtaagggtaagggtccctgcagcaaatcacaagaa
actgtttcatcgttgtcaggtgcagctagtcagaagataaaggtcagtgaagacccggtg
gcaggttttattagtcagcatgatgatgattttcctactttggcatttccgtctatttct
acagcagatttccaattcaaccttgagaaagcgtctaacattattgttgagaaagtagag
gaattcattgataaacttggtaatgccaggcttgttttagtggacttgactcatggatca
aagattttgtcctcggttagggctaaagccggagaaaagaacattgactccaaaaggttc
ttcacatttgtaggagatataactcaattgtattcaaagggaggtttgcgctgcaatgta
atagctaatgctgccaactggcgcctgaaacctggaggcggtggggtaaatgctgcaatt
ttcaatgctggtggtcctgctctagaggctgcaaccacggatcgggctaaatctcttctc
ccagggaatgccttggttgttcctcttccttcaatttctcctctgtatagcaaggaaggg
gtgacccatgtgatccatgtgcttggaccaaatatgaacccacatagaccaaattgtctc
gacaatgactataccaaaggctgcaaagttcttcgagatgcttactcatcactgtttgaa
ggatttttatctattgctaagacccaagtgaagttccccagtagaagcagtcaaagtatt
cagctagagctttcaatatcagaagataaaactgagaatattcttagaaatcatttttca
catagtgatcaagagattaaagaatatggcaactatgaatctgacagaagtaagcaatgc
aaggaatctgaaaatgaagttgttgttgtcatgggcaaagaacaagaaatggttttatca
ttgtcaggtgcagctagtgagaagataaaagtgattgaagagccagcggcaagttctatt
agtcagcgtggttttgatgttcccactctggcatttccatcaatatctacagcagatttc
aaatttaaccttgagaaggcgtctaatattattgttgagaaaatagaggaattcatggat
aggcttggtaatgccaggcttgttttagtggatttgactcatcgatcagagattttgtcc
ttggtaagggctaaagctgcacaaaagaacattgactccaaaagcttcttcacatttgta
ggagatataactcgacttaattcagagggaggtttgcactgcaatgtaatagctaatgct
gccaactggcgcctgaaacctggaggtggaggtgtgaatgctgcaatcttcaatgccggt
ggttcaggtttagaggctgcgaccaagaatcaggctatgtctcttcttccagggactgct
gtggttgtaccccttccttcaatttctcccttgtctattagggaaggggtgacccatgta
atacatgttcttggaccaaatatgaacccagagagaccaaattgccttgatgatgactat
atcaaaggctgcaaaattcttcaagacgcttactcatcactctttgaagggtttttatct
atagctaagacccaagcgaagtttcccaagagaagcagtaaaagtattctgtcagagcct
tcagtaccagaagataagattatcggaactatgactaaaacctgggccccttgggttcaa
tctctatataacattgcaatgcagccagagaagtataaggatgaagtgctggaggcatca
gatgatgttgttgtattgaatgataagtatccaaaggcaaaacagcatcttttggtgttg
gcaagatttgaaggtcttgattgcttggcagatgcacgtaaagagcaccttcagttgtta
acgacaatgcatgctatgggtttgaagtgggctgagaaattcttgcatgaagatgcagca
ttggtcttccgccttggatatcactcggtcccttcaatgcgacaactgcacctgcatgtt
attagccaagattttgactccaaacatctcaagaataagaagcattggaactctttcaat
gccgcctttttccgtgattctttagatgtgattgaagaagttagtaatcatggaaaagca
acgttacaagatgataacagactgatgtcaatggagttgcgttgccacaggtgtagaagt
gcacaccctaacatggccagactaaaatctcatatcagcaactgccaagctcctttccct
gctgccctacaggaaaatggccgtctagtgcttgcgcaaagtaactctggctgtgacccc
tag
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