Theobroma cacao (cacao): 18597562
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Entry
18597562 CDS
T02994
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 2
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tcc01009
]
18597562
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcc03021
]
18597562
Enzymes [BR:
tcc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
18597562
Protein phosphatases and associated proteins [BR:
tcc01009
]
HAD phosphatases
Fcp/Scp phosphatases
18597562
Transcription machinery [BR:
tcc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
18597562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
dsrm
DSRM_2
Motif
Other DBs
NCBI-GeneID:
18597562
NCBI-ProteinID:
XP_007026742
UniProt:
A0AB32V2S0
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Position
5:833012..839987
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AA seq
862 aa
AA seq
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MSRLGFKSVVYHGDVCLGELDTIPVSDRNFQFPNNEIRIHHISPPSERCIPLSVLHTVSS
FPVRCKLESSSPVEQPHLIHLHASCFYELKTAVVLVGDEEVHLVPMPSKQKKFPCFWCFS
VPTGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRGWLARETDTIRHSGM
SAELRRYIDDRMLLKQYTESDCVVDNGKMFKVQMEEVPPLSDGHEKVVRPVIRLQERNIV
LTRINPEIRDTSVLVRLRPAWEELRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPEA
HLIGTKQLLDRVVCVKSGSRKSLLNVFRDGKCHPQMAMVIDDRSKVWEDKDQPRVHVVPP
FAPYYAPQAETANAVPVLCVARNVACNVRGLFFKEFDENVIRKISEVFYEDEVVNLPLAP
DVSNHLMLEDAGFAPNGNGGAPISEGMNGVEVERRLNQLEEKHVSDSSMHLVMNNPELRS
ETSQPPAAIVPNVVGPASLTAPLPSQKPSLLGAPGLLSAPTLLGASVRRESNTIDSDYDM
KRRALGSKQTLDLRNQSSVQPPLLSKVPAQIYSSSILPQGGWLVEEDNNKAHLNDRSSGS
AQESDATKSDKLRNQNPFSHSAPGSVSIGLPSHASQLKVEEARAGLDTQKQNVLPAGHLS
EIGGTQNHVSSTEGGKLNLLPSHLSISVLQEIGRRCGSKVEFRTVVSTSKDLQFSVEVLF
TGEKIGVGMGKTRKDAQQQAAELALHNLAEKYLAYIAPRSGAVDRDFNKLSLGTENGFLW
DVNPASSEALREDGLPKDSTSEVAEVEPGSNSSSLVNQPVQKRANSPRSSESMPSKRSKE
EVLRRLRSLSSSRQPKNEHPIS
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtttagggtttaaatcggtggtttatcacggagacgtttgtttgggagaactg
gacactatccctgtctcggacaggaatttccagttcccaaacaacgaaattcgaatccac
cacatctccccacccagcgaacgatgcattcctctttccgttctccacaccgtttcctca
ttccccgttcgttgcaagctcgaatcctcttcccctgtcgaacaaccgcatttgattcac
ctccacgcctcttgcttttacgaattgaagacggcggtggttttggttggagatgaggag
gttcacttagtgccaatgccgagtaaacaaaagaagtttccgtgcttttggtgcttttcg
gttcctacaggactgtacaattcctgcttaggaatgcttaatttaaggtgcctagcgatt
gtttttgatctcgacgaaacgctgattgtcgcgaacacaatgaagtcgtttgaggataga
atcgaagctcttaggggttggcttgcgcgggagactgatacgattcggcattcggggatg
tcggctgaattaagaaggtatatagatgaccggatgctgttgaagcagtacacggagagt
gattgcgtcgtggataatggaaaaatgtttaaggttcaaatggaagaggttcctcctttg
tctgatggccatgagaaagttgttcggcctgtgattaggttgcaggagaggaatattgtt
cttactcgtatcaatcctgagattcgtgataccagtgtgcttgtgaggttacgtcctgca
tgggaggaattgcgaagttatttgactgcaaaaggacgaaaacgctttgaagtttatgtt
tgtaccatggctgaaagagattatgccctagagatgtggaggcttcttgatccagaggca
cacctgataggcacaaagcaactcctggaccgtgttgtttgtgttaaatccggttctagg
aaatctttgctaaatgtgttccgagatggcaagtgccatccacagatggcaatggtaatt
gatgaccgttcaaaggtctgggaggataaggatcaacctcgagttcacgtagttcctcct
tttgctccgtattatgctcctcaggcagagacagcaaatgcagttcctgttctctgtgta
gcaagaaatgttgcatgcaatgtcaggggtttgtttttcaaagagtttgatgagaatgta
ataaggaaaatatctgaagttttttatgaagatgaggtggtaaacctgcctcttgctccc
gatgtgagcaatcacttgatgttagaggatgctggttttgctccaaacgggaatggtggt
gcgcctatcagtgaaggaatgaatggagttgaagttgagcggagactgaatcaattggag
gagaagcatgtttcggactcttccatgcatctagtaatgaataaccctgagttgaggtct
gaaacctctcagccacctgctgcaattgttcccaatgttgttggtcctgcatctttgaca
gcaccattgccttctcagaaacctagtttgcttggagctcctggtctgctttcagctccc
accttacttggagcttctgtaagaagagagagcaacactattgatagtgattatgacatg
aagagaagagcccttggctcaaaacagactttagacttaaggaaccagagctcagtccaa
cctccactcctatctaaagtacctgcacagatatattcatcatcaatactgcctcaggga
ggttggttggtggaagaagacaacaataaagcacatctaaatgatcgatcatcaggctct
gctcaagaatctgatgcaacaaaatctgataaactgcgaaatcagaatccattttctcat
agtgcaccaggttctgtttccattggcttaccatcacatgcatcccaactgaaagttgaa
gaggcacgtgctggacttgatactcaaaaacagaatgttctgcctgcaggtcatttatca
gagattggcggaactcagaatcatgtgtcttccactgaaggtggaaaattgaatcttcta
ccctcccatttatcaataagtgttctacaagaaattggacgaagatgtggttcgaaggtt
gagttcaggactgtggtaagcacgagtaaggatttgcaattttctgttgaggttttattc
accggtgagaagattggtgttggaatgggcaagacaaggaaggatgctcagcaacaagct
gctgagcttgctcttcataacctggcagaaaaatatttagcatatatagcacctcgttca
ggagctgtggatagagatttcaataaactttctcttggaactgaaaatggatttctgtgg
gacgtgaatcctgcatcaagtgaagcacttagagaagatgggttgcctaaagatagtact
tctgaggttgctgaagttgaacctgggagtaattcatctagccttgtaaatcaaccagtg
caaaagcgtgccaattcaccaagatcgtctgaatccatgccaagcaaacgatcaaaggaa
gaagttctgcgtcgattacgaagtctatcatcctcacggcaaccgaaaaatgagcatccg
atttcatga
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