Theobroma cacao (cacao): 18597725
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Entry
18597725 CDS
T02994
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC2A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcc04131
]
18597725
04121 Ubiquitin system [BR:
tcc04121
]
18597725
Enzymes [BR:
tcc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
18597725
Membrane trafficking [BR:
tcc04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
18597725
Ubiquitin system [BR:
tcc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
18597725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-RING_16
zf-C3HC4_3
Rad50_zn_hook
DUF7129
Anti-TRAP
zf-RING-like
Zn_ribbon_PF0610
Motif
Other DBs
NCBI-GeneID:
18597725
NCBI-ProteinID:
XP_007026969
UniProt:
A0AB32V319
LinkDB
All DBs
Position
5:1631467..1633201
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AA seq
369 aa
AA seq
DB search
MESIRSPYWCYRCNRFIRIRVRSPQDSIHCPDCGGGFIEEIETPSRSPIHQRFPAAAMYS
DTPSPALSPSPTATPRFRRARRNAGDRSPFNPVVVLRGPTSETDGVVPERGNNNFELYYD
DGSGSGLRPLPASMSEFLMGSGFDRLLDQLSQLEVNGVARFEQPPASKAAIESMPVIKIV
GSHVSTESHCAVCKEPFVLDSEAREMPCKHIYHSDCILPWLSIRNSCPVCRHELPTESSG
NNLGENEAVRDEEAVGLTIWRLPGGGFAVGRFTGGRRAAEREFPVVFTEMDGGFNNAGAP
RRISWAPSGRRSQESRGLGRVFRSFISFFGRFRSSSSRSGSDSRFTRRSRSSSVFDRSSR
RDSDWDFED
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgattaggtcaccctattggtgttacagatgcaaccggttcatcaggatccgg
gtccgatccccccaagattcgatccattgccccgactgcggcggcggattcattgaagaa
attgaaacaccctctcgatctcccatccaccaacgtttcccggccgctgccatgtactct
gacactcccagcccagctctcagccctagccccactgctactcctcgtttccgccgagct
cgacgaaacgctggtgatcggtcccctttcaaccccgttgttgtcctccgtggacccacc
tcggaaaccgacggcgtagttcctgaaagaggaaacaacaatttcgagctttattacgat
gatgggtccggctcgggtcttcgtcccttacctgctagcatgtcggagtttttaatgggt
tcgggttttgatcggcttcttgatcaattatctcaattagaagtaaacggtgtcgctcgt
tttgagcaaccgcctgcttcgaaagcggcgattgaatcaatgccggtgattaagatcgtt
ggaagtcacgttagcacggaatctcactgtgccgtttgtaaagagcctttcgtgctcgat
tctgaagctcgggaaatgccttgtaagcatatttatcattcggattgtattttaccttgg
ctttcaattcgaaactcttgtccggtttgccgccatgagttgccaacggaaagtagcgga
aataatttgggggaaaacgaggcggttagagacgaagaagctgtggggttaaccatatgg
aggttaccgggaggtgggtttgcggtgggcaggtttactggaggaagaagagcagcggag
agggagtttccggtagtgtttacggagatggatggggggtttaataatgcgggtgctcct
agaaggatttcatgggcgcctagtgggagaaggtcacaagagagtagaggattggggcgg
gtttttcggagttttatttcgtttttcgggaggtttaggagttcttcatctcgttcaggt
tcagattctaggtttacgaggagaagtagatcgagttcagtgtttgataggtcatctaga
agggatagcgactgggatttcgaggattga
DBGET
integrated database retrieval system
