Theobroma cacao (cacao): 18597911
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Entry
18597911 CDS
T02994
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 57
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tcc03009
]
18597911
Enzymes [BR:
tcc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
18597911
Ribosome biogenesis [BR:
tcc03009
]
Eukaryotic type
90S particles
Helicases
18597911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Cas3-like_C_2
AAA_19
Glucan_synthase
DUF6033
Motif
Other DBs
NCBI-GeneID:
18597911
NCBI-ProteinID:
XP_007027268
UniProt:
A0AB32V2G7
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Position
5:complement(2605765..2610289)
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AA seq
532 aa
AA seq
DB search
MEKGASFLFGGTNFNKKKFASDIARFKEKTETEDKVDYLSLFESGNPEREEFTVSTKKRK
RKQAVSEAVEGFNVFKSSKKALVESVENQKDEEEDKLSKEKKKLNQKLEADAILRKKFNI
HVSGNNVASPLKSFAELSSVYGCESYLLRNFAELGFKEPTPIQRQAIPVLLSGRECFACA
PTGSGKTLAFVSPMLMKLKHASSEGVRAVILCPTRELAAQTTRECKKLAKGNKFYIKLLT
KKLIRSADLSKLPCDILISTPLRLSSAIKKRKLNLSRVEYLVLDESDKLFELGLLKQIDS
VVKACSNPSIIRSLFSATLPDSVEELARTIMPDAVRVIIGRKNTASKSINQKLVFAGSEE
GKLLALRQSFAEKLNPPVLIFVQSKERAKELYEELKFDNIRASVIHSDLSETQRENIVND
FRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSAAAYIHRIGRSGRAGRSGEAITFYT
EDDVPFLRNIANVMAGSGCEVPSWIMALRKLRWKKHRPKRESISTKPNEAED
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaggcgcttcttttttgttcggcggcaccaacttcaataaaaagaagttcgcc
agcgatatcgctcggtttaaggagaaaacggaaactgaagataaggtggattatttgagc
ttgttcgagagtggaaatcccgaaagggaggaatttaccgtttctaccaagaaaagaaag
cgtaaacaagcagtttcagaagcggtggagggatttaatgtctttaagagttcgaaaaaa
gcattggtagagagcgtagagaaccaaaaagatgaggaagaagataagctttccaaagag
aagaagaaattgaaccagaaactggaggcggatgcgattctgcggaaaaagtttaatatt
catgtctctgggaataatgttgcatctccacttaagagtttcgcagagttaagctcagta
tatggatgtgagtcctatttattacgcaattttgctgaacttggatttaaagagccaaca
ccaattcaacggcaggctattccggttcttctatctggtcgggagtgctttgcttgtgct
ccaactggatccggaaaaaccttggcttttgtatcaccaatgcttatgaaactcaagcat
gcatcatctgaaggtgttagagctgttatattgtgtcctacacgtgaattagctgctcag
acaaccagagagtgcaaaaaactagcaaaaggaaataaattttatatcaagttgttgact
aaaaagctcataagaagtgctgatttatcaaagctgccttgtgatatacttatatcaaca
ccacttcgcttgagttcagctatcaagaaaagaaaacttaatttgagcagggttgaatat
cttgtcctggacgagtctgacaaactgtttgaactgggcttgttaaagcagatcgattct
gtggtcaaagcatgttctaatccttcaattatacgctcattatttagtgctactttacct
gattctgttgaggagcttgcacgcaccattatgcctgatgctgttcgagttattattgga
agaaagaatactgcttccaaatctataaatcaaaagttagtttttgctggaagtgaagaa
gggaaactccttgcacttcgtcaaagctttgcagagaaattgaatccgccagttttaata
tttgtacaaagcaaagaacgagcaaaggaactgtatgaggagctgaaatttgataatatt
agagctagtgtcatccattctgatttatctgaaacacagcgtgaaaatattgtcaatgac
ttccgagctggcaaaacatgggttttgattgctactgatgtcattgcccgtggtatggac
ttcaagggtgtcaactgtgtaattaattatgattttccagattctgctgctgcatacatt
caccgaattggccggtccggcagagcagggaggagtggagaagctattactttctacaca
gaagatgatgttccatttttgcgtaacatagctaatgtaatggcaggatcaggctgtgag
gttccgtcttggatcatggctttgcgtaagctgagatggaagaagcatagaccaaaaagg
gagtctatttcaaccaaaccaaatgaagcagaagactaa
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