Theobroma cacao (cacao): 18597930
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Entry
18597930 CDS
T02994
Name
(RefSeq) zinc finger protein JACKDAW
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcc03000
]
18597930
Transcription factors [BR:
tcc03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
18597930
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-C2H2_STOP2_C
zf-met
zf-C2H2_4
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
18597930
NCBI-ProteinID:
XP_007027297
UniProt:
A0AB32V3A9
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Position
5:2726201..2729712
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AA seq
494 aa
AA seq
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MSGDAFSMPASRGGFVQDQNNANPNPKANPNPVKKKRNLPGTPDPDAEVIALSPKTLMAT
NRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRTNKEVRKKVYICPEKTCVHHDPSRAL
GDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYKCDCGTLFSRKDSF
ITHRAFCDALAEESARLTSVAATNLNFRNDTVNLPHGFAGRGVQDVAGISQLGSGFGQDF
TGMPAAGLPEIVQMASGNLFGSSSLTNFDNHGHFPGFDKSGATSTNANLSLSPLPQGLKE
EGGSKGNLMESLSSLYSETQNKQPKPAAPMSATALLQKAAQMGSTRSNPSFFGNSFGVMS
SSSSHTVSLSSTQDRNDQLHQVYPNHVKEQETFMASSSVSMSTDAGLGSSNFNSVASATS
NNLEQLMLQTGAKHSNPSQLKMHHPGSNSIDQSLTRDFLGMSNDQSARPFLPQDLAKFAS
IGSTMGLSQFTSNH
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtgatgcgttttccatgcctgcttcaagaggagggtttgttcaagaccaaaat
aatgcaaaccctaaccctaaagctaatcctaatcctgttaagaagaagcgaaatcttcca
ggaactcctgatccagatgctgaagttattgctttatctcccaaaactcttatggctaca
aacagattcatatgtgaaatatgcaacaaaggtttccaaagagaccaaaacttacagctt
catcgccggggtcacaatcttccatggaagctcaggcaaagaaccaacaaagaggtccga
aagaaggtttatatctgtcctgagaaaacctgcgttcaccacgatccatccagagctctt
ggcgacctcactggaataaagaaacattatagcagaaaacatggggagaagaagtggaag
tgtgagaaatgttcaaagaaatatgcagttcaatcagactggaaagctcactccaaaact
tgtggtactagagagtacaagtgcgactgtgggacactattttccagaaaagacagcttt
atcacccatcgagctttttgtgacgccttagctgaagagagtgcacgactcacttctgtt
gcagccacaaacctaaatttcagaaatgatactgtgaatctgccgcatggatttgctggc
cggggagttcaagatgttgctggaatttctcaactcggttcgggtttcggacaagatttc
actgggatgcctgcagcaggtttgcctgagattgttcaaatggcttcaggcaatctcttt
ggctcatcttcactgaccaattttgataaccacggtcacttccctggatttgacaagagt
ggtgcaacttcaacaaatgccaatctctccttatcgccattgccacaagggttaaaagaa
gaaggtggaagcaaaggtaatttgatggaaagcttgtcgtctctctactcggaaactcaa
aacaagcaacccaagcctgctgcacccatgtccgcaactgcactcctgcaaaaagcagcc
cagatgggttcaacaagaagcaacccatcgttctttgggaacagttttggtgtaatgagc
tcatcttcttctcacacggttagtctgagttcaactcaggatagaaatgatcagctgcac
caggtttatccaaatcatgtgaaggaacaagagactttcatggcatcaagtagtgtatca
atgagtactgatgcaggtctcggaagttcaaattttaattctgtggccagtgcaacgagc
aacaatcttgagcagctcatgttacaaacaggagcaaaacacagtaacccaagtcaacta
aagatgcaccaccctggttcaaattccattgatcaaagtctgaccagagacttccttggc
atgagcaacgatcaatctgctcgtccatttttaccccaagacctagccaaatttgcatca
attggctcaaccatgggcttgagtcaattcaccagcaaccactga
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