Theobroma cacao (cacao): 18597993
Help
Entry
18597993 CDS
T02994
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
18597993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcc03019
]
18597993
03009 Ribosome biogenesis [BR:
tcc03009
]
18597993
04131 Membrane trafficking [BR:
tcc04131
]
18597993
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tcc04147
]
18597993
Messenger RNA biogenesis [BR:
tcc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
18597993
Ribosome biogenesis [BR:
tcc03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
18597993
Membrane trafficking [BR:
tcc04131
]
SNARE
SNARE associated proteins
Others
18597993
Autophagy
Aggrephagy
Other aggrephagy associated proteins
18597993
Exosome [BR:
tcc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
18597993
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_2
AAA_5
AAA_22
AAA_33
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
AAA_28
Mg_chelatase
ATPase_2
Parvo_NS1
nSTAND_NTPase5
AAA_18
ABC_tran
NB-ARC
Viral_helicase1
NACHT
AAA_7
AAA_lid_PRS2_C
TsaE
IstB_IS21
DUF815
Zeta_toxin
Vps4_C
AAA_24
Zot
Motif
Other DBs
NCBI-GeneID:
18597993
NCBI-ProteinID:
XP_017977280
UniProt:
A0A061ETA0
LinkDB
All DBs
Position
5:complement(3093438..3098083)
Genome browser
AA seq
805 aa
AA seq
DB search
MSNQAESSDSKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVSLHPDTMEKLQLFRGD
TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVH
ILPVDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCV
VAPDTEIFCEGEPVRREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLERIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDESIDAEILNSMAVSNEHFQTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPVAKEVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRRDN
PEAMEEDVEDDVAEIKPAHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFAE
TGSRAAASDPFAASAGGADEDDLYS
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaccaagcagaatcctccgactcgaaggggacaaagagagattttagtacggcg
atcttggaaagaaagaaggcacccaatcgcctcgtcgttgatgaggcaatcaacgacgat
aactctgttgtttctctccatcctgataccatggaaaagctccagctgtttcgcggtgac
actatcttgatcaagggaaagaagaggaaagatactatttgcattgctcttgcagacgac
acatgtgatgaaccaaagatcagaatgaataaggttgtcaggtcaaacttgagggtcagg
cttggtgatgttgtctctgtgcatcagtgtccagatgttaagtatggcaaacgtgtccac
atcttgcccgtggatgacacaattgaaggggttactggaaatctcttcgatgcttacctg
aaaccttactttctggaagcataccgcccagtgaggaagggtgatctcttccttgtgaga
ggtggaatgagaagtgtagaattcaaggttattgagactgatcctcccgagtactgtgtg
gttgcaccagacactgagatattctgcgagggagaacctgtcaggagggaggatgaaaat
agattagatgaggtaggttatgatgatgttggtggagtgagaaaacagatggctcagatt
cgggaattggtggagcttccattgaggcatccacagctctttaaatcaattggtgtgaag
ccacctaaaggaattttgctttatgggcctcctggatctggaaagactttgattgcccgt
gctgttgcaaatgaaactggtgctttctttttttgcatcaatggaccagagatcatgtct
aaattggctggagagagtgaaagcaatctcagaaaagcatttgaggaagcagagaaaaat
gcaccatctattatattcattgatgaaattgattcaattgctcccaagcgagagaagacc
catggtgaagttgagaggaggattgtctctcagctgttgacattgatggatggacttaaa
tcccgtgcacatgttattgtcattggggccacaaatcgtcccaacagcattgatccggct
ctcagaaggtttgggagatttgatagggaaattgatattggcgtccctgatgaagttggc
cggcttgaggtgcttcgtatccacacaaagaacatgaagctggccgaagatgttgattta
gaaagaattgctaaggacacccatggttatgttggtgctgaccttgcagctctctgtact
gaggctgcattacagtgcattagggaaaagatggatgtgattgacttggaagatgagtca
atagatgcagagattctcaactctatggcagtctcaaatgagcacttccagactgctctt
gggacaagcaatccatcagcactgcgggaaactgttgttgaagtgcccaatgtcagttgg
gaagatattggtggcctcgagaatgttaaaagggagcttcaagagactgttcaatatcca
gtggagcatcctgagaagtttgagaagtttgggatgtcaccctcaaagggagtactcttc
tatggccctccaggatgtgggaaaactcttctggccaaagctattgccaatgagtgtcag
gcaaacttcattagtgtcaagggtccagaattacttaccatgtggtttggagaaagtgag
gccaatgtacgtgaaattttcgacaaggctcgccaatctgctccttgtgtcctgttcttt
gatgaacttgattcaattgctacccagagaggaagcagtgtaggtgatgcagggggtgct
gctgatagggttttgaaccaacttcttactgagatggatggcatgtctgccaaaaaaact
gttttcatcattggagccaccaaccgacctgacattatagatcctgcacttctgcgacca
ggtcgtcttgatcagttgatctatattcctctacctgatgaggattcccgccatcagatc
tttaaggcttgcttgaggaaatcaccagtagcaaaagaggtcgacctccgagctcttgcc
aaatatactcaaggctttagtggggcagatattacagaaatttgtcagcgtgcatgtaaa
tatgccataagggaaaacattgagaaggatatcgagagggaaaggagaagaagggataac
cctgaagctatggaggaagatgttgaggatgatgtggcagaaatcaagcctgctcatttt
gaggaatcaatgaagtttgctcgcaggagtgtgagtgatgctgacatccgcaaatatcaa
gcttttgcgcaaacattgcagcagtcaaggggatttggaagtgaatttaggtttgctgaa
actggttccagggctgctgcatctgatcctttcgcagcttcagctggaggagctgatgag
gatgacctttacagttaa
DBGET
integrated database retrieval system
