Theobroma cacao (cacao): 18598307
Help
Entry
18598307 CDS
T02994
Name
(RefSeq) mRNA-decapping enzyme-like protein
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
18598307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcc03019
]
18598307
Messenger RNA biogenesis [BR:
tcc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
18598307
mRNA degradation factors
5'-3' decay
Decapping complex
18598307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
Motif
Other DBs
NCBI-GeneID:
18598307
NCBI-ProteinID:
XP_017977713
UniProt:
A0AB32WID7
LinkDB
All DBs
Position
5:6761719..6766019
Genome browser
AA seq
365 aa
AA seq
DB search
MSQTGKLMPNLDQQSTKMLNLTVLQRIDPFIEEILITAAHVTFYEFNIDSNQWSRKDVEG
SLFVVKRNTQPRFQFIVMNRRNTDNLVENLLGDFEYEVQVPYLLYRNAAQEVNGIWFYNP
RECEDVANLFSRILNAYSKVPAKPKVSSSKSEFEELEAVPSMSVIEGPLEPPATTSPATD
APEDSSFVNFFSAAMNLGTNAPNGANSIQPYHSISTTPLSSHVPPAVSTPASAPSVSSLT
LSAPPSLDSLSSSNRVTNLVKPSAFFAPPPSSSSSSLIMPPLSSSMPTASALHPPLNLQR
PYGTPMLQPFPPPTPPASLTPGVPPTLHDGPLISRDKVRDALLMLVQDDQFIDMFYQALQ
KVHHS
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagactggaaagttgatgccgaatctcgatcaacagagcacgaagatgctgaat
ctcactgttctccaacgaatcgatcctttcatcgaagagattttgattactgccgctcac
gtcaccttctacgaattcaacatcgatagcaatcaatggagtcgaaaagatgttgaagga
tctctctttgttgttaagaggaatacgcaacctcggttccagttcattgtaatgaatcgg
cgtaacacagataatttggtggagaatctacttggagattttgaatacgaggttcaagtt
ccgtacttgttgtatcgcaatgcagcacaagaagttaatggcatttggttttacaatccg
cgtgaatgtgaggatgttgcaaatctctttagcagaatacttaatgcatattcaaaagtt
cctgcaaagccaaaagtatcttcaagcaaaagtgaatttgaggagctagaagcagttcct
agcatgtctgtgatagaaggccccttggagccgccagcaactacctctcctgccactgat
gctcctgaagattcatcatttgtcaacttctttagtgctgctatgaatcttggaactaat
gctccaaatggtgcaaattcaatacagccttaccattctatctcaaccacccctctgtct
tctcatgtaccacctgctgtctccactcctgcatctgctccgtcagtttcatcccttact
ctttctgctcctccttcgcttgattcattaagtagcagcaaccgggtaaccaatctcgtt
aagccttctgcattttttgcaccacccccttcttcatcgtcgtcatcattgatcatgccg
cctctctcttcatccatgccaactgcttctgctcttcatccacccctcaatctgcaacgt
ccttatggcactccaatgcttcaaccttttccaccacctactccacctgcatctctgact
cctggtgtgccacctactttgcatgatggacctcttattagcagggataaagttcgtgat
gcactactaatgcttgttcaggatgatcaattcattgacatgttctaccaggcattgcaa
aaggtgcatcattcttga
DBGET
integrated database retrieval system
