Theobroma cacao (cacao): 18598501
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Entry
18598501 CDS
T02994
Name
(RefSeq) sister chromatid cohesion 1 protein 4
KO
K06670
cohesin complex subunit SCC1
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tcc03036
]
18598501
Chromosome and associated proteins [BR:
tcc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
18598501
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Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
CNDH2_N
Motif
Other DBs
NCBI-GeneID:
18598501
NCBI-ProteinID:
XP_017977177
UniProt:
A0AB32WCI2
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Position
5:complement(13462791..13474590)
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AA seq
1198 aa
AA seq
DB search
MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEVPIALRLSSHLL
LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE
LPDNEIFQGNYVDHHVSSREQITLQDTMDGVVYSTSQFGLDERFGDGDTSQIGLLDEELF
LDRVAASGHGGVSVADLQGSDEQQKQDPSNSEVMPMDCSGDQVEGLAANSEFVEYDQDSA
TPGVVEVPNLSVVHESLAGDDHVEPEHHNLTELANFECVENVSSGKANHLHGHNNVVDLS
LQNDKNHDAIVIVPPENGSHIRDLEKEQSKPQGNSVHDVVSVEYKSADGTRGGPDGLDRV
EDMHNGAMHSMDRADGECAESPSCSNVTFDLEDPARRTCSSSTCVPTSDAYMENDQASHK
SEFRNDVETTDNLDESFSPAKTSNPSCPLESPSRPTVIDGEAQACQEPNDSENMKKPVIH
EEVSSVQVLGSDNLAAVDQNSVDLSRREEEVRAFGASIEVEGEACQTQMSEPALCDDQLE
NLNNCAMSDLPAPEMLLSALEGHIDKPSDLLGESTPDKEVFAGDDETGAGMKLISGKKRS
ITESTLTVESLNSVESFGRPRSRRTAESVPDDDDLLSSILVGRRSSVFKMKPTPPPEIAS
MKRARSAPRPSASKRKVLMDDTMVLHGDTIRLQLVNTEDIRRIRKKAPCTRPEISLIQRQ
FLEDEIFTEPIFTGLASDLSCLHSEAYDLRGIRISEGNEVHASSEVAKDPEFSVRPNVDG
GGIEGSSVPVICGNDEQAQCAGTSMQTDTQQAEYNDLNAQQDKNAVDDVPQVLRHEPLDG
VVEMEIGRGNVEVANATLNEFEVSSPTNLATEDTSNMTAGKISHTVDGSMLNDASCLPPD
QKMSTQPGEDAELDMRNDKGTNPTEVLENVVESAVPSETESKATNEFSLEESKAGTSVEV
SIDIQADGFAPIENGMNSLATVQTVEGLNGAQNADEIGYGKVGVVDEARVEDALLDHDDK
DPICKGSEERKMDSIYSEKVDVVLKNASLNDGETPNFQEVNAVNAEMTSLVDNQAEFEHV
AIANDTEFLNVDDDELVEDDDDGMPCGDESRLLENSGWSSRTRAVAKYLQNLFEDEAIHG
RKVLSMDSLLDRKTRKEASRMFFETLVLKTRDYIHVEQVKPFDNICIKPRAKLMKSDF
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgttttattcacagtttatattggcgaagaaaggtccattggggacaatatggatagca
gctcatctagagaggaagcttcgaaagaatcaggtggcggatactgatattggcgtctct
gttgactctattctgtttcctgaagtaccaattgcactacggttgtccagtcatcttctt
cttggtgtggtgaggatatattctagaaaggtgaattacctttttgatgattgcagtgaa
gccttgctcaagataaagcaggcttttcgctccactgcagtagatttaccaccagaagaa
tctactgcaccctatcattccatcactttgccagagacttttgatcttgatgactttgag
ctgcctgataatgagatttttcagggtaactatgttgatcatcatgttagttcaagagag
cagattacgcttcaggataccatggatggcgtggtttactccacatcacaatttggattg
gatgagcggtttggtgatggtgacacttctcagattggtctgcttgatgaggagctattc
ctagatagggttgcagcatcaggacatggtggagtttcagtggctgacctacaagggtca
gatgaacaacaaaaacaagacccaagtaattcagaggttatgccaatggattgcagtggg
gatcaggttgaaggtctagctgcaaattctgaatttgtcgagtacgatcaggattcagct
actcctggagtagtggaagtgcctaacttgtctgttgttcatgagtcattggctggtgat
gaccatgtggaaccagaacatcataatcttacagaattagccaattttgaatgtgtagaa
aatgtgtcttctggtaaagcaaatcatctccatgggcataacaatgtagtggatctttct
ttacaaaatgataaaaatcatgatgctatagttattgtgcctcctgagaatggcagccat
atacgtgacctggagaaagaacaaagtaaaccacaaggaaattctgtccatgatgttgtg
tctgtggagtacaaatctgctgatgggactagaggaggacctgatggtttggatagggtc
gaagatatgcataatggtgctatgcactcaatggatagagctgacggggaatgtgcagaa
tctcctagctgctccaacgtcacctttgatttggaggaccctgctcgaagaacatgttca
agtagcacctgtgtgcccacctcagatgcctatatggagaatgatcaagcatcacataaa
tctgaattccgcaatgatgtggaaaccactgataatttggacgagtcattctcacctgcc
aaaacttcaaatccttcctgtccgttggaatcacccagtagaccaacagttattgatggt
gaagctcaagcttgtcaggaaccaaatgattctgaaaatatgaaaaaacctgttattcat
gaagaggtctcatctgttcaagttcttggaagtgataatttggctgctgtagatcaaaac
tcagtggatttgtccagaagggaggaagaagttcgtgcttttggagcttccattgaggtg
gaaggtgaagcctgccaaactcagatgtcagaacctgctttatgtgatgatcagctggaa
aatttaaacaattgtgctatgtctgacttgcctgcacctgaaatgttactctctgcacta
gaaggacatattgataaacctagtgatttgctgggtgagtctaccccagacaaagaggtc
tttgcaggggatgatgaaactggtgctggaatgaaactcatttcaggaaaaaagcgaagt
ataacagaaagtacattaactgtagagagtttaaactcagttgaatcattcgggaggcct
cgatccaggagaactgcagaatcagttcctgatgatgatgacttgttgtcttcaatttta
gttggaagaagatcttcagttttcaaaatgaaacccactcctcctcctgaaatagcatcc
atgaaacgtgcacgatctgcaccaagacccagtgcctccaagagaaaagtgcttatggat
gatactatggtcttacatggcgatacaatacgcctgcagttggttaatactgaagacata
cgtcgtatacgcaagaaagcaccttgcactcggcctgaaatttcgttgattcagagacaa
ttcttggaagatgaaatcttcactgaacctatatttactggtttggcgagtgacttgtca
tgtttgcacagtgaagcatatgatctgaggggaatcaggatttctgaaggtaatgaagtc
catgcatcatctgaagtagcaaaggatcctgagttttctgtaagacctaatgttgatgga
ggtggaattgaaggaagctctgtgcctgtgatttgtggaaatgatgagcaagcacaatgt
gctggcacttctatgcagactgatactcagcaggctgagtacaacgatttgaatgctcag
caggataaaaatgctgttgatgatgtgcctcaagttttgcgacatgaacctttagatggg
gttgtggaaatggaaatcggcagagggaatgttgaagttgctaatgcaactctgaacgag
tttgaggtatcatcccctactaatctggctactgaagatactagtaacatgacagctggg
aagataagccacactgtagatggttccatgttaaatgatgcatcatgccttccacctgat
caaaaaatgagtactcagcctggggaggatgctgaattggatatgagaaatgacaaagga
actaatcctactgaagttttggaaaatgttgttgaaagtgctgttccatctgaaacagaa
tcaaaagcaactaatgagttttcgttagaagaaagtaaagccggtacatcagttgaagtc
agtatagacattcaggcagacggctttgcacctattgaaaacggaatgaattctcttgca
actgtgcaaactgttgagggtctgaatggtgctcaaaatgcagatgaaattggatatggc
aaggttggtgtagtggatgaggctcgtgttgaggatgcactcttggatcatgatgacaag
gacccaatctgtaagggtagtgaagaacgtaaaatggattctatatattcagaaaaagtt
gatgtggttctaaaaaatgcttcattaaatgatggagaaactccaaactttcaggaagtt
aatgcagtcaatgcagaaatgacctctcttgtggataatcaagctgaatttgagcatgtc
gcaattgcaaatgatacagaattcctgaacgtagatgatgatgagctagttgaggatgat
gatgatggcatgccatgtggtgatgaaagtcgtcttcttgaaaatagtggatggtcttct
cgtaccagggctgttgccaagtatctccagaacttatttgaggatgaagctatacatggt
cgtaaggtactttctatggacagtctattggatcgtaaaacacgtaaagaagcatcaagg
atgttttttgaaacactggttcttaagacgagagattacatccacgtagaacaggtgaaa
ccctttgacaacatctgtataaagcctcgagcgaagctcatgaaatctgatttctga
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