Theobroma cacao (cacao): 18598571
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Entry
18598571 CDS
T02994
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcc04131
]
18598571
04121 Ubiquitin system [BR:
tcc04121
]
18598571
Enzymes [BR:
tcc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
18598571
Membrane trafficking [BR:
tcc04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
18598571
Ubiquitin system [BR:
tcc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
18598571
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
Zn_ribbon_19
zf-rbx1
zf-RING_11
zf-RING_UBOX
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-Nse
CxC4
Rad50_zn_hook
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
18598571
NCBI-ProteinID:
XP_007028207
LinkDB
All DBs
Position
5:complement(17637560..17639975)
Genome browser
AA seq
312 aa
AA seq
DB search
MSTGRNTHWCYRCRRPVLLQGRDAVCCYCHGGFVQELDDMVHISPLDFFGLDGDEDRIQR
FGLMDAFSALMRQRLADRNFNHNIRGRTDSIPENTSPFGPLLIFGGQIPFRLSGNGGFEA
LFNGAPGIGFTRGNAGDYFIGPGLEELFEQLSANDRRGPPPASRSSIDAMPTIKISRRHL
HSDSHCPVCKDKFELGSEARQMPCNHIYHSDCIIPWLEQHNSCPVCRQELPPQGPGSSRN
YHSSGQSSSSSLGTNSSGRESRENHSRRNPFSYFWPFRSSNSSSSHNGAAGSSSPSVHEN
NHSMGYSGWPFD
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactggaagaaatacccattggtgttatagatgcaggcgaccagttctccttcaa
gggcgtgatgcagtttgctgctattgtcatgggggatttgtccaagaactagacgatatg
gtgcatatcagtcctctggatttttttggactagatggtgatgaagatcgcatccaaagg
tttggtctcatggatgctttttctgccttaatgaggcagcgactagctgacagaaatttt
aaccataatatcaggggaagaacagattcaattcctgagaacacttcaccatttggtccc
ttattgatttttggtggtcaaattccctttaggttgtctgggaatggtgggtttgaagct
ctttttaatggggcacctggaattggttttacacgaggtaatgctggagattattttata
ggtcctgggttagaagaattgtttgaacagctctcggctaatgatcgtaggggccctccc
ccggcatcccgatcttcaattgatgcaatgcctaccattaagatttcacgaaggcatctt
cattctgattcacactgtcctgtttgcaaagataaatttgaactgggatctgaagcaaga
caaatgccatgcaaccatatatatcattcagattgtatcatcccatggctggagcagcac
aactcgtgtcctgtttgtcgacaagaattgccaccacaaggaccaggtagcagccgcaat
tatcactcaagtggtcaaagcagtagcagcagtttgggaactaattccagtggaagggag
agtagggagaatcacagtagacggaatccgttctcatatttctggccattccgttcgtct
aattctagctctagccataatggagctgctggaagcagttccccgagtgtacatgagaac
aaccactcgatgggatatagtggatggccttttgactga
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