KEGG   Theobroma cacao (cacao): 18598663
Entry
18598663          CDS       T02994                                 
Name
(RefSeq) rhomboid-like protein 20
  KO
K25216  ubiquitin-associated domain-containing protein 2
Organism
tcc  Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:tcc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tcc04121]
    18598663
Ubiquitin system [BR:tcc04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   LMBR1L-GP78-UBAC2 complex
    18598663
SSDB
Motif
Pfam: UBA UBA_7 Rhomboid DER1 UBA_RAD5A CUE SK_channel
Other DBs
NCBI-GeneID: 18598663
NCBI-ProteinID: XP_007028329
UniProt: A0AB32V2Z4
LinkDB
Position
5:complement(21252615..21268254)
AA seq 293 aa
MNGGPSGFNNAPVTRIFLIACALFTVFFGIQGRSFKLGLSYQDIFRKLSIWKLIVSVFAF
SSTPELMFGLYLLYYFRVFERQIGSNKYSVFILFSVMVSFFFEVMALAILKDPTANLLTS
GPYGLIFASFVPFYFDIPVSTWFRIFGVRFSNKSFIYLAGLQLLLSSWKRSLLPGICGIL
AGSLYRLNVFHIRRAKFPEFVTSFFSRLSWPSTGNPPTASARNLAGNVPSYTTRQAERTY
PSTAAPSAIEPPEDCIATLVSMGFDRNSARQALVHARNDVNAATNILLEAQAH
NT seq 882 nt   +upstreamnt  +downstreamnt
atgaacggcggcccctccggtttcaataatgctccagtgactagaatctttttaattgct
tgtgctctcttcaccgtattctttgggatccaaggccgttctttcaagcttggtttgtcc
tatcaggatattttcagaaaacttagcatatggaagttaattgtatcagtttttgccttt
tcatccactccagaactgatgtttggactttatctactatactacttcagggtgtttgag
agacagattggttccaacaagtattcagtctttatcttgttctcagtaatggtttcattc
ttctttgaggttatggctctagctattcttaaagatcccacagctaacctgctcacttct
ggaccttatggcctcatatttgcctcatttgtaccattttattttgacatcccagtttca
acatggtttcgtatatttggtgttcgcttctccaataagtctttcatatatctagctggt
cttcagcttcttctatcgtcttggaaaagatctctcttgccagggatatgtggcatcctg
gctggttcattatatcgtctaaatgtctttcacatccgcagggctaagttccctgagttt
gttacgtccttcttctcacggctttcttggccttctacggggaacccacctacagcttca
gcaaggaatcttgcaggaaatgtaccttcctacacaacccgccaagcggagagaacctat
ccgtctactgctgcaccttcagccatagagccgccagaggactgcattgctaccctggtg
tcaatggggtttgatcggaactcagccaggcaggcacttgtgcatgccagaaatgacgtc
aatgctgccacaaacattcttcttgaagcacaggcccactaa

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