Theobroma cacao (cacao): 18598879
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Entry
18598879 CDS
T02994
Name
(RefSeq) ABC transporter A family member 1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
18598879
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcc02000
]
18598879
Transporters [BR:
tcc02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
18598879
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Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
ACT_13
R1_ABCA1
SMC_N
RsgA_GTPase
AAA_29
Motif
Other DBs
NCBI-GeneID:
18598879
NCBI-ProteinID:
XP_017977171
UniProt:
A0AB32WH63
LinkDB
All DBs
Position
5:complement(26304951..26334985)
Genome browser
AA seq
1883 aa
AA seq
DB search
MGTSKRQLKAMLRKNWLLKIRHPFITASEILLPTIVLLLLIGIRTRVDTQIHAAQPYIRK
DMLVEVGDGISPNFQQVLELLLAKGEYIAFAPDTLQTRQMINLISIKFPLLQLVSKIYED
ELELDAYIRSDLYGTCDFKNCSNPKIKGAVIFHHQGPQLFDYSIRLNHTWAFSGFPDVKS
IMDTNGPYLNDLELGVDIIPTMQYSFSGFLTLQQVLDSFIIFASQQTKTGMDSENREFSP
LHSTGATSSLELPWTQFSPTKIRIAPFPTREYTDDEFQSIIKSVMGLLYLLGFLYPISRL
ISYTVFEKEQKIREGLYMMGLKDGIFHLSWFITYAFQFAFSSGIITICTMDSLFKYSDKT
VVFVYFFVFGLSAIMLSFLISTFFTRAKTAVAVGTLSFLGAFFPYYTVNDEAVAMILKVI
ASFLSPTAFALGSINFADYERAHVGLRWSNIWRASSGVNFLVCLLMMLFDTLLYCAVGLY
LDKVLPSESGVRYPWNFIFHKCFCRKKSTIKHHVSCYEVKVNDMISKRKSIIPRKDVSGP
ALEAISLEMKQQEIDGRCIQIKDLHKVYATKKGKCCAVNSLKLNLYENQILALLGHNGAG
KSTTISMLVGLLPPTSGDALVFGKSILTHMDEIRKELGVCPQNDILFPELTVREHLEMFA
VLKGVKEDTLESAVTEMVDEVGLADKLNTFVRALSGGMKRKLSLGIALIGNSKVIILDEP
TSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEADELGDRIAIMADGSLKCCGSSLFLK
HQYGVGYTLTLVKSAPTASVAADIVYRYVPSATCVSEVGTEISFKLPLASSSAFESMFRE
IESCIGRSASTETSVSEDKSYLGIESYGISVTTLEEVFLRVAGCDFDEAESVKQGNNFVS
PDIPSHEQVPKRISYAKLLGSYKRIIGVISSMVTRICGLFVAIFLSFIHFLSMQCCSCCM
ISRSMVWQHSRALLIKRAVSARRDRKTIVFQLLIPVIFLLFGLLFLKLKPHPDQPSVTLT
TSHFNPLLSGSGGGGPISFDLSWPIAKEVTKYVKGGWIQCFKQTAYKFPDSDSALADAVE
AAGPALGPVLLSMSEYLMSSFNESYQSRYGAVVMDDVYEDGSLGYTVLHNCSCQHAAPTY
INVMNSAILRLATSDKNMTIRTRNHPLPMTKSQRLQHHDLDAFSAAIIVNIAFSFIPASF
AVPLVKEREVKAKHQQLISGVSVISYWVSTYIWDFISFLFPSTFAIIIFYVFGLDQFIGR
SFLPTVIMFLEYGLAVASSTYCLTFFFSDHTMAQNVVLLIHFFTGLILMVISFIMGLIKT
TASANSFLKNFFRLSPGFCFADGLASLALLRQGMKDKSSDGVFDWNVTGASICYLGVEGI
CYFLLTLGLELLPTCNLTPIRLMKWWRRKNLPGDTSVLEPLLKSSFETAIHLDEDTDVRT
ERHRVLSGSIDNSVIFLHNLRKVYPGGKNYCAKVAVDSLTFSVQAGECFGFLGTNGAGKT
TTLSMLTGEESPTEGTAFIFGKDIASNPKAARRHIGYCPQFDALLEYLTVQEHLELYARI
KGVLDYRINDVVMEKLVEFDLLKHANKPSYTLSGGNKRKLSVAIAMIGDPPIVILDEPST
GMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGRLRCIGSPQHL
KTRFGNHLELEVKPTEVSSADLENLCRIIQERLFDIPSHPRSLLDDLEVCIGGIDSIVSE
NASVAEISLSEEMIVIVGRWLGNEERIKTLISSRPISDGLFGEQLSEQLVRDGGIPLPIF
SEWWLAREKFSAIDSFVVSSFPGATFHGCNGLSVKYQLPYREGLSLADVFGHLERNRNQL
GIAEYSISQSTLETIFNHFAANS
NT seq
5652 nt
NT seq
+upstream
nt +downstream
nt
atggggacttcaaagagacaactgaaagccatgcttcggaagaactggcttcttaagatt
cgtcacccttttattactgcttctgagattttacttcctacgatcgtattgttattgtta
ataggtataagaacacgcgttgatacgcaaattcatgctgctcaaccgtatataagaaaa
gatatgttagtggaggtaggcgacggtatatcccctaatttccaacaagttttggaatta
ttgttggccaaaggagagtatatagcttttgcacctgatactctacaaacaaggcagatg
attaacttaatttccatcaaatttcccttactacagctagtttctaaaatatacgaagat
gagcttgagctggatgcatatatacgatcagatctgtatggtacttgtgattttaagaat
tgctcaaatccaaaaattaaaggagcagtgatatttcatcatcaaggtcctcagttgttt
gattatagtattcgcctcaatcacacatgggctttctctggatttcctgatgttaaaagt
atcatggacactaatggcccttatctcaatgacttggaattgggtgttgatatcatacca
acaatgcaatacagcttcagtggatttttgactcttcagcaggtgttagattcttttatc
atatttgcttcccagcaaacaaaaactggcatggatagtgaaaatagagaattttcacca
ttgcactcaactggtgcaacatcatcccttgagttaccatggacacagtttagccctaca
aagataagaatagctccctttccaactcgagaatacacggatgatgagttccagtccatc
attaagagtgtcatgggcctgttgtatttgttgggatttctctatccaatctctcgccta
attagctatactgtgtttgagaaggagcagaagataagagaaggtctttatatgatgggc
ttgaaagatggcatcttccatctctcttggttcattacatatgcttttcagtttgctttt
tcatccggtatcattacaatttgtaccatggatagccttttcaagtatagcgataagaca
gtggtgtttgtgtatttctttgtatttggactcagtgcgatcatgctatcatttttgatc
tctacgttcttcacacgagcaaaaacagctgttgcagtgggaacactttcttttcttggg
gctttctttccttattacactgtcaatgatgaggcagttgctatgatattaaaggtcatt
gcctcttttctctcccctacggccttcgctcttggatcaattaattttgctgactatgaa
cgtgctcatgtaggacttcgttggagcaatatatggagggcatcttctggagtgaacttt
ttggtttgccttttaatgatgttgtttgacacattgctatactgtgcagttggtctctac
ctagataaggtccttcccagtgaaagtggagtgcgttatccttggaactttatatttcac
aaatgcttttgcagaaagaaaagtaccataaaacatcatgtttcctgttatgaagtaaaa
gttaatgatatgatctccaaaaggaagagtattattcctagaaaggatgtgtctggacct
gctttggaagccataagcttggaaatgaagcagcaagagattgatggcagatgtatccaa
ataaaggacctacataaggtttatgccactaagaaggggaagtgctgtgctgttaactca
ttaaagctaaacttgtatgaaaaccagattctagctcttcttggccacaatggtgctggt
aaaagtacaacaatatcaatgcttgttggccttcttcccccaacgtcaggggatgctttg
gtgtttggaaaaagtattctaacacacatggatgagatacgtaaggaattgggggtctgt
ccacaaaatgatatccttttccctgaattgactgtgagagagcatttggaaatgtttgcc
gtattgaagggtgtgaaggaagatactttggagagtgctgtaactgagatggttgatgaa
gttggtttagcagataaactgaacactttcgtgcgggcactttctggtggtatgaagagg
aaattgtctcttggcattgcattgataggaaatagtaaggttattattcttgatgaacct
accagtggaatggatccatattcaatgcgtttgacctggcagttaataaaaaaaataaag
aagggcagaataatattactaacaacacactcaatggatgaggctgatgaactaggggat
cggatagccatcatggctgatggttctttgaaatgctgtggaagctcccttttcttgaag
catcagtatggggttggttatactcttacactagtgaagtctgcaccaactgcttctgta
gctgccgatattgtttatcgttatgttccatcagcaacatgtgtaagcgaggttggaact
gaaatttccttcaagcttcctctggcctcttcatcagcttttgaaagtatgtttagggaa
attgaaagttgcataggaagatcagcttctacagaaacaagtgttagtgaggataaaagt
tatcttggcattgaaagttatggtatatctgttacaaccttggaggaagtgtttttgaga
gttgcggggtgtgactttgatgaagctgaatctgttaagcagggaaataattttgtttca
cctgatatcccttctcatgagcaagtgcccaaaagaatttcctatgctaagcttttggga
agttataaaaggattattggggtcatatcctccatggtgaccagaatttgtggtttattt
gttgctatatttctaagtttcatacacttcttgagtatgcaatgctgcagctgttgcatg
atttcaaggtcaatggtttggcaacattctagggcattacttataaagagggcagtgtct
gctcgaagagaccgcaaaacaattgttttccagcttttgattcctgtgatcttcttgctt
tttggacttctatttcttaagcttaagccacatcctgatcagccgtctgtgaccctcact
acttcacattttaatcctcttttaagtggttctggtggtggtggtccgatttcttttgat
ctatcctggcctattgcaaaggaggtcacaaagtatgttaaaggaggatggattcaatgt
tttaaacagactgcatataaatttcctgattcagacagcgctttagctgatgctgttgag
gcagcaggaccagctttaggaccagttttactttcaatgagtgaatatctaatgtctagc
tttaacgaatcataccagtcaaggtatggggctgttgtgatggatgacgtgtatgaagat
gggagtttggggtacactgtactacacaattgttcttgtcagcatgctgctccaacttat
atcaacgtgatgaactctgcaattcttaggcttgctaccagtgacaaaaatatgacaatt
cgaacacgcaatcaccctctgccaatgacaaaaagccagcggttacaacatcatgatctg
gatgcattctctgctgcaattattgttaacattgcgttttcattcattcctgcttcattt
gctgttccccttgtaaaggaacgtgaagttaaagctaagcaccaacaactgattagcgga
gtttcagtaatttcatattgggtttcaacgtacatatgggacttcatcagtttcttattt
ccttcaacttttgccataattatcttctatgtgtttggtcttgatcaattcattggaaga
agtttcttgccaacggtcatcatgtttctggagtatgggctggcagttgcgtcatctaca
tattgccttacgttcttcttctctgaccacactatggctcagaatgtggttctcttgatc
cactttttcacaggactcattctcatggtcatctcatttattatggggcttataaagaca
actgctagtgcaaattcttttctgaagaatttcttcagattatcccctgggttctgtttt
gctgatgggcttgcttcactggctcttcttcggcaagggatgaaagataaatctagtgat
ggggtttttgattggaatgttactggtgcttccatttgttatcttggagttgagggcatt
tgttacttccttctgacacttgggcttgaactcttgcccacttgtaatttgactccaata
agacttatgaagtggtggaggagaaaaaatttgccgggtgacacttctgttttagaacct
cttctgaaatcttcctttgaaactgctattcaccttgatgaagatacagatgtaagaaca
gaaagacatagggttctttcaggctccattgacaatagcgttattttcttacataatctt
cggaaggtgtatcctggaggaaagaattactgtgcaaaggtagctgtagattctttaact
ttctctgttcaggctggagaatgttttggatttttgggaacaaatggagctgggaaaaca
accactttgtccatgttaactggagaagaatctccaactgaaggaactgcttttattttt
ggcaaagatatagcttcaaacccaaaggctgcccgtcgtcatattgggtactgccctcag
tttgatgctctattggaatatcttaccgtacaagagcaccttgaactttatgcaaggata
aaaggagttttggattacagaataaatgatgttgttatggaaaagctggtggagtttgac
ttgctaaagcatgctaacaaaccatcatatacacttagtggagggaacaagcgtaaatta
tctgttgctattgcaatgattggagatcctccaattgtcattcttgatgagccatccaca
ggtatggatcccattgcaaaaagattcatgtgggaagtaatttcccgcctatcaaccaga
caaggaaagacagctgtgatccttactacccatagcatgaatgaagctcaagctctatgt
accagaattgggataatggttggaggcaggctaaggtgcattggaagtccacagcacttg
aaaacaaggtttggaaatcatcttgagctggaggtcaaaccgactgaagtgagctctgct
gatttggaaaatctttgccgcattattcaagaaaggctctttgacattccttcccatcca
agaagcctactagatgaccttgaagtctgtattgggggcatcgactccattgtgtctgaa
aatgcatcagtggcagaaattagcttgtcagaggagatgatagttattgttggacgttgg
cttggaaatgaagaaagaataaagacgcttatttcttcaagaccgatttctgatgggctt
tttggtgaacagttgtcggagcagttggttcgagatggtggtataccattgccaatattt
tctgagtggtggttagctagggagaagttttcagccatcgattcatttgtagtatcttca
tttcccggtgcaacttttcatgggtgcaatggattaagtgttaaatatcagttgccgtat
agggagggtctctcacttgcagatgtttttgggcacctagagagaaacagaaatcaactg
ggcatagccgaatacagtatcagccaatcaactcttgagactatattcaatcattttgcg
gctaactcatga
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integrated database retrieval system
