Theobroma cacao (cacao): 18598904
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Entry
18598904 CDS
T02994
Name
(RefSeq) nuclear pore complex protein NUP93A
KO
K14309
nuclear pore complex protein Nup93
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
18598904
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcc03019
]
18598904
Messenger RNA biogenesis [BR:
tcc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
18598904
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
TPR_12
KwaB
TPR_2
TPR_1
TPR_8
PrmA
TPR_7
Motif
Other DBs
NCBI-GeneID:
18598904
NCBI-ProteinID:
XP_007028698
UniProt:
A0AB32V372
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All DBs
Position
5:26003483..26013268
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AA seq
865 aa
AA seq
DB search
MASEQDMSSWTDLLHSSSKLLEQAAPSAQFPPLQRNLDQLEALSKKLKAKTLRTEAPSRS
IAATRLLAREGINAEQLTRDLKSFELKTTFEDVFPAEATSVEEYLQQVHEIAMVSAIQEA
QKDNLRSFNDYMMKVLEEDWQNEKRDFLQSLSRISTLPKTNMLDKSITGARSGQIVSMAS
SPQVSSGPSGMELLPLANKPVVEKKVSVYAEVVRNLSNARQQGLPFKPATAFKAAYESLG
TEASSGKSVNMQKMWHLIQTLMGEDSTMQRSVSRKMSLVIGARRHLEWGHEKYIMDTVQS
HPAQAALGGAVGNLHRVHAFLRIRLRDYGILDFDAGDARRQPPVDTTWQQIYFCLRTGYY
DEARQVAQSSRASHQFAPLLTEWINSGGMVPADIAVAAAEECEKMFRMGDRVGRAAYDKK
KLLLYAIISGSRRQVDRLLRDLPSLFSTIEDFLWFILSAVRDLPGGTSSVILNEGLVPYS
LDDLQAYLNKFEPSYYTKNGKDPLVYPYVLLLSIQLLLAVSYLSKETGDEGYNIDAAHIA
IVLADNGVLYEGAGAGAGKKLGMMDAYAEASSIIRQYGSMYIRLGNLQMALEYYAQAAAA
VGGGQVSWTGRGNVDQQRQRHLMLKQLFTELFLRDGGIYLLLGSRGAGEEGELGRFLTDH
KARQQFLLEAARHCQDAGLYEKSIEIQKRVGAFSMALDTINKCLSEAICALSCGRLDGES
RTAGLIHSGNEILETFKYYPEVSLQEREHVLEQQTVLRQLEAILSIHKLTRLGQYLDAVR
EVAKLPFLPLDPRAPDVTSNAFENLSPHVQACVPDLLKVALTCLENVTDTDGSLRAMRAK
IATFLANNMHQNWPRDLYETVARRL
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgagcaagacatgagcagctggaccgatcttctccactcttcctccaagctt
ctcgagcaagccgctccttctgctcagtttcctcctcttcagagaaacttagatcagtta
gaagcactctcgaagaagctcaaggcaaaaaccttaagaactgaggctccttctcgatct
attgctgccacaaggctacttgcacgtgagggaattaatgctgagcagcttacacgtgat
ctgaagtcgtttgaattgaagacaacattcgaggatgttttccctgctgaagcaacaagt
gttgaggagtatctgcagcaggttcatgaaattgcaatggtttcagccatccaagaagct
cagaaggataacctcagaagttttaatgattatatgatgaaagtgttggaggaagactgg
cagaacgaaaaacgagactttttacagagcctgagccggatttcaactttacccaagact
aacatgcttgataaaagcattactggtgctcgttcaggtcaaatagtttccatggcttct
agtcctcaggtttcatcaggtccctctggcatggagcttttacctttagctaacaagcca
gttgttgagaaaaaagtgtcagtatatgctgaagttgtaagaaatctgagcaatgcaaga
caacaaggcttaccgtttaaacctgcaacggcttttaaggctgcatatgagagtttgggc
actgaagcatctagtggcaaatcagttaacatgcagaaaatgtggcatcttattcagaca
ctaatgggtgaggattcaacaatgcaacgaagtgtttcaagaaagatgtcattagtaatt
ggtgcgaggcgtcacctggaatggggacatgagaaatacattatggatacagtacaaagc
catcctgcgcaagctgctcttggtggagctgttgggaatttgcatagagttcatgccttt
cttcggattcgtttgagggattatggaattctggattttgacgcaggtgatgctcgaagg
caacctcctgttgataccacttggcagcagatttatttttgcttgaggactgggtattat
gatgaagcaagacaagttgcccaatcatcccgtgcttctcaccagtttgcaccactgctt
acagagtggattaacagtggaggcatggttccagctgacattgcagttgctgctgcagaa
gagtgtgaaaaaatgtttagaatgggtgatcgggttggtcgagctgcatatgacaagaaa
aagttattgctctatgctatcatatccggttctcgcaggcaagttgaccgtctcctcaga
gatttaccatcacttttcagtaccatagaggatttcctgtggttcatattgtcagcagta
cgggacttacctggtggaacctcatctgttattctgaatgagggtttagtaccatacagt
ctggatgatttgcaagcttacctaaacaaatttgagccatcatattacacaaagaatgga
aaggaccctctggtatacccgtatgtcttgcttttaagtatccagttactactggctgtt
tcatacttgtctaaagaaacaggagatgaaggatataacattgatgctgcacacatagca
atcgtgttagcagacaatggggtcctttatgaaggtgctggtgctggtgctggaaaaaaa
ctggggatgatggatgcttatgcagaagcatccagcattattaggcagtatggctctatg
tatataaggcttggtaaccttcaaatggcactagaatattatgcacaagctgctgctgca
gtaggtggtggacaggtatcatggactgggagaggtaatgtggatcagcaaaggcaaagg
cacttgatgctgaagcagctttttactgagctattcttacgagatggtgggatttatctt
ttacttggttcaagaggtgcaggagaggaaggtgaattgggaagattcttgactgatcat
aaagcaagacaacagtttctgcttgaagctgcccgccattgtcaagatgctgggctgtac
gagaaatctatagaaattcagaagagagttggggcattttcaatggcattggatacaata
aataagtgcctatctgaagcaatttgtgccctatcgtgtggtagattggatggcgagagt
cgaactgctggcctcattcattctggcaatgagatcttggagactttcaaatattatcct
gaagtcagtctccaagagagggaacatgttttggagcaacaaactgtattgagacagctt
gaggcaatactgtctatccacaaattgacaagactagggcagtatcttgatgctgtaagg
gaagttgccaaacttccattccttccattggatccacgagcacctgatgttacctctaat
gcgtttgaaaatttatctcctcatgtccaagcttgtgtgccggacctgctaaaggtagct
ctaacttgtttggaaaatgtgactgatacagatggatcacttcgcgctatgagagcgaag
attgcaaccttccttgcaaataatatgcatcagaattggccccgtgatttatacgaaacg
gttgccaggcgcttgtga
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