KEGG   Theobroma cacao (cacao): 18599020
Entry
18599020          CDS       T02994                                 
Name
(RefSeq) protein LST8 homolog
  KO
K08266  target of rapamycin complex subunit LST8
Organism
tcc  Theobroma cacao (cacao)
Pathway
tcc04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:tcc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    18599020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tcc04131]
    18599020
Membrane trafficking [BR:tcc04131]
 Autophagy
  Other autophagy associated proteins
   mTORC1 complex
    18599020
   mTORC2 complex
    18599020
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_DCAF4 WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_Nup120_160 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_HPS5 WD40_RFWD3 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_RIG_2nd Beta-prop_IFT140_2nd Beta-prop_SCAP Beta-prop_NWD2_C Beta-prop_WDR19_1st Beta-prop_IP5PC_F PROPPIN Beta-prop_DCAF12 Beta-prop_NUP159_NUP214 Beta-prop_SPT8 Nucleoporin_N Mala_s_1-like Beta-prop_WDR35_TULP_N CFAP43_N Beta-prop_WDR19_2nd Beta-prop_WDR35_2nd
Other DBs
NCBI-GeneID: 18599020
NCBI-ProteinID: XP_007028857
UniProt: A0AB32V3B2 A0A061F498
LinkDB
Position
5:complement(27724926..27729387)
AA seq 316 aa
MTQPSVILATASYDHTIRFWEAKSGRCYRTIQYPDSQVNRLEITPDKRYLAAAGNPHIRL
FDINSNSPQPVMSYDSHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPGCQREYESRA
AVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAA
NNHGTCYVWRLLRGNQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVK
IWNVDGFTLEKTLIGHQRWVWDCVFSVDGAYLITASSDTTAKLWSMSSGEEIKTYQGHHK
ATVCCALHDGAEPSPC
NT seq 951 nt   +upstreamnt  +downstreamnt
atgacacaaccgtcggtaatcctagcaaccgctagctatgatcacactattcgcttttgg
gaggcgaaaagcggccgctgttaccgtactattcaataccctgactcgcaagttaatcgg
cttgagataaccccagacaagcgctacctggctgcagctggtaatcctcacattcgcttg
ttcgatattaactccaacagccctcaacctgtaatgagctatgattcacatacaaataat
gttatggccgtaggatttcaatgtgatggaaactggatgtattctggttctgaggatggc
actgtaaaaatttgggatttgagagctccaggttgccaaagggaatatgaaagtcgtgct
gctgtaaatacagttgtcttacacccaaatcagactgagttgatatctggtgaccaaaat
ggcaacattcgtgtatgggatttgacagctaactcttgtagctgtgaattggtgcctgag
gttgatacagctgtgaggtctcttacagtcatgtgggatggaagcctggtagttgctgca
aataatcacgggacatgctatgtttggcgcttattaagaggaaatcagactatgaccaac
tttgagccacttcacaagctacaagcacataatggatacatactcaaatgtctcctttct
cctgagttttgtgaaccccacagatatttggccactgcatcttctgaccacactgtcaag
atatggaatgttgatggcttcacattggagaaaactttaataggacatcagcgctgggta
tgggactgtgttttctcagtggatggtgcctatctcataacagcttcttctgatacaaca
gctaagctttggtccatgtcaagtggtgaagagattaagacgtatcaaggacatcataaa
gcaactgtttgttgtgcactacatgatggagctgagccttctccatgttaa

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