Theobroma cacao (cacao): 18599104
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Entry
18599104 CDS
T02994
Name
(RefSeq) DNA polymerase delta small subunit
KO
K02328
DNA polymerase delta subunit 2
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03030
DNA replication
tcc03410
Base excision repair
tcc03420
Nucleotide excision repair
tcc03430
Mismatch repair
tcc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
18599104
03410 Base excision repair
18599104
03420 Nucleotide excision repair
18599104
03430 Mismatch repair
18599104
03440 Homologous recombination
18599104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tcc03032
]
18599104
03400 DNA repair and recombination proteins [BR:
tcc03400
]
18599104
DNA replication proteins [BR:
tcc03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
18599104
DNA repair and recombination proteins [BR:
tcc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
18599104
MMR (mismatch excision repair)
DNA polymerase delta complex
18599104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
DNA_pol_D_N
Motif
Other DBs
NCBI-GeneID:
18599104
NCBI-ProteinID:
XP_007028988
UniProt:
A0AB32V4M1
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All DBs
Position
5:28617230..28623467
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AA seq
442 aa
AA seq
DB search
MEAMEVDSQTQLQRKQSAYLSLDENFEIQNEVYRGQQYSQIYFARLHMMRTLLYSLAPNW
KSHLPVCTVLGLEEGKECIIVGTLYKHMKLKPCILDEYSKERSTAPLVKPHNFMHQDDYL
VLEDESGRVKLGGTMLSPSVYVTGVVIALHGKETTAGDFFVEDVLEAGLPPQIERPLQSR
EDKYVVFVSGLTVGSGASNPLQFQLLVDHITGHLGDEEEQGLAADIVHLVIAGNSVEISR
GLLNGQNLASKDQSRLSEPIKELDILLTQIAASLPLDIMPGSNDPANFSLPQQPLNRCLF
PGSATYNTFRSCTNPHCFELDNIRFLGTSGQNINDLTEYSEAKDKIDFLERTLRWRHLAP
TAPNTLGCYPFTDRDPFLIGSCPHVYFVGNQEKYETRLLKGSEGQLVRLICIPRFCETGV
AVVLNMRNLECHALTFGTQFSS
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggaagccatggaagtcgactcgcaaacgcagctgcagagaaaacaatctgcttacctc
tcgttggatgagaatttcgagattcagaacgaagtttacagaggccaacagtacagtcaa
atttactttgctcgtctccacatgatgagaactttgctttattcccttgctcccaactgg
aaatcccatctccccgtttgtacagttttggggctagaagaaggcaaagaatgcatcatt
gttgggaccctttacaagcacatgaaactcaaaccttgcattcttgatgaatactctaag
gagaggtctactgcccctcttgtaaaacctcataattttatgcatcaagatgattatttg
gttttggaagatgagagtggaagagttaagcttggtggcactatgctttcaccttctgtt
tatgtaacaggtgttgtcattgcattgcatgggaaggaaaccactgcaggggacttcttt
gttgaagatgttctggaagctggcctaccacctcagattgagcggccgctgcaatcaaga
gaagataagtatgtcgtttttgtctccgggcttactgttgggagcggcgcttctaatccc
cttcaatttcagcttcttgttgatcatataacaggacatttgggagatgaagaggagcaa
ggccttgcagcagacatagttcatcttgtgattgctgggaactctgttgaaatttctcgt
ggacttcttaacggacagaatttagcttctaaggaccagtcaaggttgtctgagccaatt
aaagagctggatattttgttgactcagattgctgcaagtttgccgttggatatcatgcct
ggatctaatgaccctgcaaatttttctttgcctcagcagcctttgaacagatgccttttt
ccagggtcagcaacttataacacttttaggtcctgtaccaatcctcattgctttgagctt
gataacatcagatttcttggaacatcgggtcagaacataaatgatctcactgagtattca
gaggcaaaggataaaattgactttctggaaaggacattaagatggaggcatcttgcccca
acagcacctaatactcttggatgttatcctttcactgatcgggatcccttcctaattggt
agctgccctcatgtttactttgttggtaatcaggaaaagtatgaaactcgcttgttaaaa
ggatcggaagggcaattagtaagacttatttgcattcctagattctgtgaaacaggagtt
gctgttgtgctcaacatgagaaatctcgaatgccatgctctaacttttgggactcaattc
agctcataa
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